myRT

myRT report for GCA_000210075.1_ASM21007v1

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Seq: FP929033.1 Bacteroides xylanisolvens XB1A draft genome (5976145 bp)
Overview 1 RT 1: 947110-950613 bp 2 RT 2: 1877166-1883672 bp 3 RT 3: 4356805-4369212 bp Neighborhood of RT #1 [947110, 950642] RVT-DGRs Avd_like DUF1566 Neighborhood of RT #2 [1877166, 1883728] REC RVT-Retrons NGN_SP_UpxY KOW_NusG Neighborhood of RT #3 [4356805, 4369343] PDDEXK_2 RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 rpsA Feature: gene Location: 947110-947403 bp Feature: gene Location: 947602-947880 bp Feature: gene Location: 947843-949264 bp Ori: CBK65990.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 948218-948920 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 94821 8-948920 bp Feature: gene Location: 949279-949686 bp Ori: CBK65991.1 Feature: domain Description: Avd_like Location: 949312-949621 bp Feature: domain Description: Avd_like Location: 94931 2-949621 bp Feature: gene Location: 949833-950642 bp Ori: CBK65992.1 Feature: domain Description: DUF1566 Location: 950364-950613 bp Feature: domain Description: DUF1 566 Location: 950364-95061 3 bp Feature: gene Location: 1877166-1878869 bp Ori: CBK66698.1 Feature: domain Description: REC Location: 1877982-1878216 bp Feature: domain Description: REC Location: 1 877982-1 87821 6 bp Feature: gene Location: 1878866-1879516 bp Feature: gene Location: 1879488-1881707 bp Ori: CBK66700.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1879689-1880274 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 879689-1 880274 bp Feature: gene Location: 1881917-1882147 bp Feature: gene Location: 1883249-1883728 bp Ori: CBK66702.1 Feature: domain Description: NGN_SP_UpxY Location: 1883255-1883510 bp Feature: domain Description: NGN_SP_UpxY Location: 1 883255-1 88351 0 bp Feature: domain Description: KOW_NusG Location: 1883561-1883672 bp Feature: domain Description: KOW_NusG Location: 1 883561 -1 883672 bp Feature: gene Location: 4356805-4357641 bp Ori: CBK68459.1 Feature: domain Description: PDDEXK_2 Location: 4356826-4357504 bp Feature: domain Description: PDDEXK_2 Location: 4356826-4357504 bp Feature: gene Location: 4357906-4360017 bp Feature: gene Location: 4360225-4361355 bp Ori: CBK68461.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4360546-4361089 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4360546-4361 089 bp Feature: gene Location: 4361406-4367447 bp Ori: CBK68462.1 Feature: domain Description: DUF4011 Location: 4362636-4363149 bp Feature: domain Description: DUF401 1 Location: 4362636-43631 49 bp Feature: domain Description: DEXXQc_SF1 Location: 4363488-4363929 bp Feature: domain Description: DEXXQc_SF1 Location: 4363488-4363929 bp Feature: domain Description: DEXXQc_SF1 Location: 4364916-4365675 bp Feature: domain Description: DEXXQc_SF1 Location: 436491 6-4365675 bp Feature: domain Description: TIGR00376 Location: 4365804-4366194 bp Feature: domain Description: TIGR00376 Location: 4365804-43661 94 bp Feature: domain Description: MTES_1575 Location: 4366347-4366632 bp Feature: domain Description: MTES_1 575 Location: 4366347-4366632 bp Feature: domain Description: DUF3320 Location: 4366962-4367097 bp Feature: domain Description: DUF3320 Location: 4366962-4367097 bp Feature: gene Location: 4367544-4369343 bp Ori: CBK68463.1 Feature: domain Description: rpsA Location: 4367613-4369212 bp Feature: domain Description: rpsA Location: 436761 3-436921 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603), REC (smart00448), RVT-Retrons, NGN_SP_UpxY (cd09895), KOW_NusG (cd06091), PDDEXK_2 (pfam12784), DUF4011 (pfam13195), DEXXQc_SF1 (cd18043)
TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784), rpsA (TIGR00717)