myRT

myRT report for GCA_000211415.1_ASM21141v1

Download annotations/find similar RTs

Seq: GL890774.1 Enterobacter mori LMG 25706 genomic scaffold ENTMO1_scaffold3, whole genome shotgun sequence (690082 bp)
Overview 1 RT 1: 558612-562310 bp Neighborhood of RT #1 [558612, 562310] IbrB_like InsE DEDD_Tnp_IS110 RVT-GII GIIM COG3547 Feature: gene Location: 558612-559238 bp Feature: domain Description: IbrB_like Location: 558741-559044 bp Feature: domain Description: IbrB_like Location: 558741 -559044 bp Feature: gene Location: 559721-560050 bp Feature: gene Location: 559956-560969 bp Feature: domain Description: InsE Location: 559968-560238 bp Feature: domain Description: InsE Location: 559968-560238 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 560301-560487 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 560301 -560487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 560508-560706 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 560508-560706 bp Feature: domain Description: GIIM Note: maturase Location: 560781-560955 bp Feature: domain Description: GIIM Note: maturase Location: 560781 -560955 bp Feature: gene Location: 561158-562126 bp Feature: domain Description: COG3547 Location: 561185-562103 bp Feature: domain Description: COG3547 Location: 561 1 85-5621 03 bp Feature: gene Location: 562158-562310 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IbrB_like (cd16397), InsE (COG2963), DEDD_Tnp_IS110 (pfam01548), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: GL890775.1 Enterobacter mori LMG 25706 genomic scaffold ENTMO1_scaffold4, whole genome shotgun sequence (982804 bp)
Overview 1 RT 1: 74641-78469 bp Neighborhood of RT #1 [74641, 78501] DUF4225 RVT-UG14 PRK13757 Feature: gene Location: 74641-74955 bp Feature: gene Location: 75096-75299 bp Feature: domain Description: DUF4225 Location: 75144-75294 bp Feature: domain Description: DUF42 2 5 Location: 75144-752 94 bp Feature: gene Location: 75538-77052 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 75943-76411 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 75943-76411 bp Feature: gene Location: 77056-77649 bp Feature: gene Location: 77824-78501 bp Feature: domain Description: PRK13757 Location: 77827-78469 bp Feature: domain Description: PRK13757 Location: 7782 7-78469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4225 (pfam13988), RVT-UG14, PRK13757 (type A chloramphenicol O-acetyltransferase)

Seq: GL890780.1 Enterobacter mori LMG 25706 genomic scaffold ENTMO1_scaffold9, whole genome shotgun sequence (787743 bp)
Overview 1 RT 1: 73728-77710 bp Neighborhood of RT #1 [73728, 77769] RVT-Retrons PRK15435 PEP_mutase Feature: gene Location: 73728-73862 bp Feature: gene Location: 74485-74712 bp Feature: gene Location: 74743-75702 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74920-75445 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74920-75445 bp Feature: gene Location: 75957-77003 bp Feature: domain Description: PRK15435 Location: 75987-76998 bp Feature: domain Description: PRK1543 5 Location: 75987-76998 bp Feature: gene Location: 76987-77769 bp Feature: domain Description: PEP_mutase Location: 77002-77710 bp Feature: domain Description: PEP_mutase Location: 77002-77710 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK15435 (bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada), PEP_mutase (TIGR02320)