myRT

myRT report for GCA_000214275.3_ASM21427v3

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Seq: CM001475.1 Methylomicrobium album BG8 chromosome, whole genome shotgun sequence (4446267 bp)
Overview 1 RT 1: 1511967-1514557 bp 2 RT 2: 2530425-2537108 bp Neighborhood of RT #1 [1511967, 1514571] PHA02517 IS5 RVT-GII RT_G2_intron GIIM rve_2 Neighborhood of RT #2 [2530425, 2537167] rve DDE_Tnp_1_3 RVT-GII outer_NodT PRK10614 Feature: gene Location: 1511967-1512116 bp Feature: domain Description: PHA02517 Location: 1511970-1512108 bp Feature: domain Description: PHA0251 7 Location: 1 51 1 970-1 51 21 08 bp Feature: gene Location: 1512257-1513219 bp Feature: domain Description: IS5 Location: 1512455-1513214 bp Feature: domain Description: IS5 Location: 1 51 2455-1 51 321 4 bp Feature: gene Location: 1513243-1513953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1513372-1513438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 3372-1 51 3438 bp Feature: domain Description: RT_G2_intron Location: 1513441-1513927 bp Feature: domain Description: RT_G2_intron Location: 1 51 3441 -1 51 3927 bp Feature: gene Location: 1514012-1514377 bp Feature: domain Description: GIIM Note: maturase Location: 1514042-1514231 bp Feature: domain Description: GIIM Note: maturase Location: 1 51 4042-1 51 4231 bp Feature: gene Location: 1514410-1514571 bp Feature: domain Description: rve_2 Location: 1514413-1514557 bp Feature: domain Description: rve_2 Location: 1 51 441 3-1 51 4557 bp Feature: gene Location: 2530425-2531156 bp Feature: domain Description: rve Location: 2530710-2531064 bp Feature: domain Description: rve Location: 253071 0-2531 064 bp Feature: gene Location: 2531332-2532210 bp Feature: domain Description: DDE_Tnp_1_3 Location: 2531644-2532103 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 2531 644-25321 03 bp Feature: gene Location: 2532272-2532466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2532278-2532443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2532278-2532443 bp Feature: gene Location: 2532570-2534048 bp Feature: domain Description: outer_NodT Location: 2532609-2533965 bp Feature: domain Description: outer_NodT Location: 2532609-2533965 bp Feature: gene Location: 2534057-2537167 bp Feature: domain Description: PRK10614 Location: 2534069-2537108 bp Feature: domain Description: PRK1 061 4 Location: 2534069-25371 08 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), IS5 (COG3039), RVT-GII, RT_G2_intron (cd01651), GIIM (pfam08388), rve_2 (pfam13333), rve (pfam00665), DDE_Tnp_1_3 (pfam13612), outer_NodT (TIGR01845), PRK10614 (multidrug efflux system subunit MdtC; Provisional)