myRT

myRT report for GCA_000214455.2_ASM21445v1

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Seq: AFIH01000001.1 Oribacterium sp. oral taxon 108 str. F0425 noncontiguous_finished_chromosome, whole genome shotgun sequence (2518361 bp)
Overview 1 RT 1: 983717-988899 bp 2 RT 2: 1689647-1695031 bp Neighborhood of RT #1 [983717, 989081] RVT-UG15 GloB Neighborhood of RT #2 [1689647, 1695031] DUF2262 RVT-GII RT_G2_intron GIIM CcmA Feature: gene Location: 983717-984778 bp Feature: gene Location: 985517-985783 bp Feature: gene Location: 986463-987146 bp Ori: EGL38126.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 986751-987141 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 986751 -9871 41 bp Feature: gene Location: 987275-987823 bp Feature: gene Location: 988185-989081 bp Ori: EGL36733.1 Feature: domain Description: GloB Location: 988320-988899 bp Feature: domain Description: GloB Location: 988320-988899 bp Feature: gene Location: 1689647-1689841 bp Ori: EGL36067.1 Feature: domain Description: DUF2262 Location: 1689650-1689839 bp Feature: domain Description: DUF2262 Location: 1 689650-1 689839 bp Feature: gene Location: 1689907-1690275 bp Feature: gene Location: 1690341-1691258 bp Ori: EGL37419.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1690659-1690818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 690659-1 69081 8 bp Feature: domain Description: RT_G2_intron Location: 1690818-1690917 bp Feature: domain Description: RT_G2_intron Location: 1 69081 8-1 69091 7 bp Feature: domain Description: GIIM Note: maturase Location: 1690974-1691190 bp Feature: domain Description: GIIM Note: maturase Location: 1 690974-1 691 1 90 bp Feature: gene Location: 1692580-1693371 bp Ori: EGL37016.1 Feature: domain Description: CcmA Location: 1692586-1693264 bp Feature: domain Description: CcmA Location: 1 692586-1 693264 bp Feature: gene Location: 1693355-1695031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG15, GloB (COG0491), DUF2262 (pfam10020), RVT-GII, RT_G2_intron (cd01651), GIIM (pfam08388), CcmA (COG4133)