myRT

myRT report for GCA_000215685.3_Ecoli.O104_H4.LB226692_2.0

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Seq: AFOB02000103.1 Escherichia coli O104:H4 str. LB226692 LB226692_3366376-3387947_bb, whole genome shotgun sequence (21674 bp)
Overview 1 RT 1: 18-5398 bp Neighborhood of RT #1 [18, 5451] RVT-GII GIIM PHA02517 VI_ClpV1 Feature: gene Location: 18-1310 bp Ori: EGR73116.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291-1023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291 -1 023 bp Feature: domain Description: GIIM Note: maturase Location: 1098-1281 bp Feature: domain Description: GIIM Note: maturase Location: 1 098-1 281 bp Feature: gene Location: 1902-2474 bp Ori: EGR73117.1 Feature: domain Description: PHA02517 Location: 2055-2409 bp Feature: domain Description: PHA0251 7 Location: 2055-2409 bp Feature: gene Location: 2902-5451 bp Ori: EGR73118.1 Feature: domain Description: VI_ClpV1 Location: 2938-5398 bp Feature: domain Description: VI_ClpV1 Location: 2938-5398 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), VI_ClpV1 (TIGR03345)

Seq: AFOB02000137.1 Escherichia coli O104:H4 str. LB226692 LB226692_plasmid_55989_59752-61750_bb, whole genome shotgun sequence (2002 bp)
Overview 1 RT 1: 1-1996 bp Neighborhood of RT #1 [1, 2002] PHA02517 RVT-GII GIIM Feature: gene Location: 1-126 bp Ori: EGR71443.1 Feature: domain Description: PHA02517 Location: 4-61 bp Feature: domain Description: PHA02 517 Location: 4-61 bp Feature: gene Location: 718-2002 bp Ori: EGR71444.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 991-1723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 991-172 3 bp Feature: domain Description: GIIM Note: maturase Location: 1798-1996 bp Feature: domain Description: GIIM Note: maturase Location: 1798-1996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AFOB02000115.1 Escherichia coli O104:H4 str. LB226692 LB226692_4545377-4781393_bb, whole genome shotgun sequence (236024 bp)
Overview 1 RT 1: 205851-211928 bp 2 RT 2: 228150-236022 bp Neighborhood of RT #1 [205851, 211930] InsE PHA02517 RVT-GII GIIM PHA02517 TonB-siderophor Neighborhood of RT #2 [228150, 236024] Peptidase_S6 autotrans_barl PHA02517 RVT-GII GIIM RVT-GII PHA02517 InsE Feature: gene Location: 205851-206177 bp Ori: EGR71994.1 Feature: domain Description: InsE Location: 205854-206175 bp Feature: domain Description: InsE Location: 205854-206175 bp Feature: gene Location: 206174-206656 bp Ori: EGR71995.1 Feature: domain Description: PHA02517 Location: 206237-206591 bp Feature: domain Description: PHA02517 Location: 20623 7-206591 bp Feature: gene Location: 207589-208770 bp Ori: EGR71996.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207595-208252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207595-208252 bp Feature: domain Description: GIIM Note: maturase Location: 208327-208525 bp Feature: domain Description: GIIM Note: maturase Location: 2083 27-208525 bp Feature: gene Location: 208887-209333 bp Ori: EGR71997.1 Feature: domain Description: PHA02517 Location: 208890-209331 bp Feature: domain Description: PHA02517 Location: 208890-2093 3 1 bp Feature: gene Location: 209735-211930 bp Ori: EGR71998.1 Feature: domain Description: TonB-siderophor Location: 209867-211928 bp Feature: domain Description: TonB-siderophor Location: 209867-211928 bp Feature: gene Location: 228150-232268 bp Ori: EGR72014.1 Feature: domain Description: Peptidase_S6 Location: 228303-230475 bp Feature: domain Description: Peptidase_S6 Location: 2283 03 -23 0475 bp Feature: domain Description: autotrans_barl Location: 231039-232266 bp Feature: domain Description: autotrans_barl Location: 23 103 9-23 2266 bp Feature: gene Location: 232433-232819 bp Ori: EGR72015.1 Feature: domain Description: PHA02517 Location: 232436-232817 bp Feature: domain Description: PHA02517 Location: 23 243 6-23 2817 bp Feature: gene Location: 232997-234178 bp Ori: EGR72016.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 233003-233660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 3 003 -23 3 660 bp Feature: domain Description: GIIM Note: maturase Location: 233735-233933 bp Feature: domain Description: GIIM Note: maturase Location: 23 3 73 5-23 3 93 3 bp Feature: gene Location: 234172-234519 bp Ori: EGR72017.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 234445-234514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 4445-23 4514 bp Feature: gene Location: 235111-235593 bp Ori: EGR72018.1 Feature: domain Description: PHA02517 Location: 235174-235528 bp Feature: domain Description: PHA02517 Location: 23 5174-23 5528 bp Feature: gene Location: 235590-236024 bp Ori: EGR72019.1 Feature: domain Description: InsE Location: 235701-236022 bp Feature: domain Description: InsE Location: 23 5701-23 6022 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), TonB-siderophor (TIGR01783), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414)