myRT

myRT report for GCA_000218345.1_Bacteroides_sp_2_1_56FAA_V1

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Seq: GL945043.1 Bacteroides sp. 2_1_56FAA genomic scaffold supercont1.1, whole genome shotgun sequence (2314291 bp)
Overview 1 RT 1: 1330159-1339120 bp Neighborhood of RT #1 [1330159, 1339128] GlnA3 RVT-Retrons RVT-Retrons rpsA RNase_Z Feature: gene Location: 1330159-1332348 bp Ori: EGM97717.1 Feature: domain Description: GlnA3 Location: 1330234-1332346 bp Feature: domain Description: GlnA3 Location: 1 330234-1 332346 bp Feature: gene Location: 1332589-1334808 bp Feature: gene Location: 1335015-1335683 bp Ori: EGM97719.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1335330-1335570 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 335330-1 335570 bp Feature: gene Location: 1335707-1336129 bp Ori: EGM97720.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1335716-1335881 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 33571 6-1 335881 bp Feature: gene Location: 1336271-1338064 bp Ori: EGM97721.1 Feature: domain Description: rpsA Location: 1336349-1337957 bp Feature: domain Description: rpsA Location: 1 336349-1 337957 bp Feature: gene Location: 1338214-1339128 bp Ori: EGM97722.1 Feature: domain Description: RNase_Z Location: 1338229-1339120 bp Feature: domain Description: RNase_Z Location: 1 338229-1 3391 20 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)

Seq: GL945045.1 Bacteroides sp. 2_1_56FAA genomic scaffold supercont1.3, whole genome shotgun sequence (626332 bp)
Overview 1 RT 1: 473296-477366 bp Neighborhood of RT #1 [473296, 477443] RVT-DGRs TipAS COG2369 LPD3 Feature: gene Location: 473296-473481 bp Feature: gene Location: 473742-474227 bp Feature: gene Location: 474224-475525 bp Ori: EGN05873.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 474437-475034 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 474437-475034 bp Feature: gene Location: 475901-476134 bp Feature: gene Location: 476232-477443 bp Ori: EGN05875.1 Feature: domain Description: TipAS Location: 476256-476559 bp Feature: domain Description: TipAS Location: 4762 56-476559 bp Feature: domain Description: COG2369 Location: 476679-476865 bp Feature: domain Description: COG2 369 Location: 476679-476865 bp Feature: domain Description: LPD3 Location: 477084-477366 bp Feature: domain Description: LPD3 Location: 477084-477366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, TipAS (pfam07739), COG2369 (Uncharacterized conserved protein, contains phage Mu gpF-like domain ), LPD3 (pfam18798)

Seq: GL945046.1 Bacteroides sp. 2_1_56FAA genomic scaffold supercont1.4, whole genome shotgun sequence (475210 bp)
Overview 1 RT 1: 28216-33851 bp Neighborhood of RT #1 [28216, 33851] Dam RVT-DGRs Feature: gene Location: 28216-29058 bp Ori: EGN05098.1 Feature: domain Description: Dam Location: 28219-28987 bp Feature: domain Description: Dam Location: 28219-28987 bp Feature: gene Location: 29245-29655 bp Feature: gene Location: 29669-31012 bp Ori: EGN05100.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 29879-30470 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 29879-3 0470 bp Feature: gene Location: 31502-32938 bp Feature: gene Location: 32952-33851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dam (pfam05869), RVT-DGRs