myRT

myRT report for GCA_000220745.3_ASM22074v3

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Seq: AFOO01000019.1 Vibrio cholerae HCUF01 vcoHCUF01.contig.20, whole genome shotgun sequence (237236 bp)
Overview 1 RT 1: 106463-111860 bp Neighborhood of RT #1 [106463, 111865] PRK10578 PRK10621 RVT-Retrons COG3950 COG3950 Feature: gene Location: 106463-107083 bp Ori: EGQ96713.1 Feature: domain Description: PRK10578 Location: 106478-107078 bp Feature: domain Description: PRK1 0578 Location: 1 06478-1 07078 bp Feature: gene Location: 108025-108810 bp Ori: EGQ96714.1 Feature: domain Description: PRK10621 Location: 108034-108805 bp Feature: domain Description: PRK1 0621 Location: 1 08034-1 08805 bp Feature: gene Location: 109347-110243 bp Ori: EGQ96715.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 109410-110007 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 0941 0-1 1 0007 bp Feature: gene Location: 110244-111164 bp Ori: EGQ96716.1 Gene: abpA Feature: domain Description: COG3950 Location: 110430-111129 bp Feature: domain Description: COG3950 Location: 1 1 0430-1 1 1 1 29 bp Feature: gene Location: 111254-111865 bp Ori: EGQ96717.1 Gene: abpB Feature: domain Description: COG3950 Location: 111257-111860 bp Feature: domain Description: COG3950 Location: 1 1 1 257-1 1 1 860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10578 (hypothetical protein; Provisional), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence )