myRT

myRT report for GCA_000221465.1_ASM22146v1

Download annotations/find similar RTs

Seq: GL989299.1 Vibrio cholerae BJG-01 genomic scaffold vcoBJG01.contig.165, whole genome shotgun sequence (62790 bp)
Overview 1 RT 1: 1-5024 bp Neighborhood of RT #1 [1, 5044] RVT-UG3 HDAC_classIV PRK07726 Feature: gene Location: 1-1197 bp Ori: EGS68328.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 289-751 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 289-751 bp Feature: gene Location: 2160-3080 bp Ori: EGS68329.1 Feature: domain Description: HDAC_classIV Location: 2217-3051 bp Feature: domain Description: HDAC_classIV Location: 221 7-3051 bp Feature: gene Location: 3101-5044 bp Ori: EGS68330.1 Gene: topB Feature: domain Description: PRK07726 Location: 3110-5024 bp Feature: domain Description: PRK07726 Location: 31 1 0-5024 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3, HDAC_classIV (cd09993), PRK07726 (DNA topoisomerase 3)

Seq: GL989298.1 Vibrio cholerae BJG-01 genomic scaffold vcoBJG01.contig.164, whole genome shotgun sequence (12387 bp)
Overview 1 RT 1: 10102-11215 bp Neighborhood of RT #1 [10102, 12216] rve RVT-UG8 Feature: gene Location: 10102-10287 bp Feature: gene Location: 10280-10522 bp Ori: EGS68400.1 Feature: domain Description: rve Location: 10304-10517 bp Feature: domain Description: rve Location: 10304-10517 bp Feature: gene Location: 10930-12216 bp Ori: EGS68401.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 10933-11215 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 10933-112 15 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), RVT-UG8