myRT

myRT report for GCA_000222145.1_ASM22214v1

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Seq: GL989607.1 Vibrio mimicus SX-4 genomic scaffold Scaffold2, whole genome shotgun sequence (693683 bp)
Overview 1 RT 1: 554244-563528 bp Neighborhood of RT #1 [554244, 563629] PRK09692 RVT-GII GIIM DUF4092 M60-like_N Peptidase_M60 NlpD Feature: gene Location: 554244-554402 bp Feature: gene Location: 554689-554808 bp Feature: domain Description: PRK09692 Location: 554698-554806 bp Feature: domain Description: PRK09692 Location: 554698-554806 bp Feature: gene Location: 555429-556721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 555627-556239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 555627-556239 bp Feature: domain Description: GIIM Note: maturase Location: 556293-556509 bp Feature: domain Description: GIIM Note: maturase Location: 556293-556509 bp Feature: gene Location: 557321-561982 bp Feature: domain Description: DUF4092 Location: 558584-559103 bp Feature: domain Description: DUF4092 Location: 558584-5591 03 bp Feature: domain Description: M60-like_N Location: 560648-560912 bp Feature: domain Description: M60-like_N Location: 560648-56091 2 bp Feature: domain Description: Peptidase_M60 Location: 560957-561830 bp Feature: domain Description: Peptidase_M60 Location: 560957-561 830 bp Feature: gene Location: 562721-563629 bp Feature: domain Description: NlpD Location: 563036-563528 bp Feature: domain Description: NlpD Location: 563036-563528 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-GII, GIIM (pfam08388), DUF4092 (pfam13322), M60-like_N (pfam17291), Peptidase_M60 (pfam13402), NlpD (COG0739)