myRT

myRT report for GCA_000222505.2_ASM22250v2

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Seq: AFSO01000002.1 Escherichia coli O104:H4 str. H112180282 CS2, whole genome shotgun sequence (231182 bp)
Overview 1 RT 1: 194026-197665 bp Neighborhood of RT #1 [194026, 197832] InsE PHA02517 RVT-GII GIIM COG2085 Feature: gene Location: 194026-194328 bp Feature: domain Description: InsE Location: 194065-194314 bp Feature: domain Description: InsE Location: 1 94065-1 9431 4 bp Feature: gene Location: 194384-194809 bp Feature: domain Description: PHA02517 Location: 194408-194744 bp Feature: domain Description: PHA0251 7 Location: 1 94408-1 94744 bp Feature: gene Location: 195401-196924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195674-196406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 95674-1 96406 bp Feature: domain Description: GIIM Note: maturase Location: 196481-196679 bp Feature: domain Description: GIIM Note: maturase Location: 1 96481 -1 96679 bp Feature: gene Location: 197119-197253 bp Feature: gene Location: 197419-197832 bp Feature: domain Description: COG2085 Location: 197518-197665 bp Feature: domain Description: COG2085 Location: 1 9751 8-1 97665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG2085 (Predicted dinucleotide-binding enzyme )

Seq: AFSO01000001.1 Escherichia coli O104:H4 str. H112180282 CS1, whole genome shotgun sequence (17073 bp)
Overview 1 RT 1: 13065-16678 bp Neighborhood of RT #1 [13065, 16923] TonB-siderophor PHA02517 RVT-GII GIIM Feature: gene Location: 13065-15263 bp Feature: domain Description: TonB-siderophor Location: 13200-15261 bp Feature: domain Description: TonB-siderophor Location: 132 00-152 61 bp Feature: gene Location: 15665-16111 bp Feature: domain Description: PHA02517 Location: 15668-16109 bp Feature: domain Description: PHA02 517 Location: 15668-16109 bp Feature: gene Location: 16228-16923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16234-16405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 34-16405 bp Feature: domain Description: GIIM Note: maturase Location: 16480-16678 bp Feature: domain Description: GIIM Note: maturase Location: 16480-16678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TonB-siderophor (TIGR01783), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)