myRT

myRT report for GCA_000222545.2_ASM22254v2

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Seq: AFWC01000223.1 Escherichia coli O104:H4 str. H112180283 CS223, whole genome shotgun sequence (870 bp)
Overview 1 RT 1: 1-788 bp Neighborhood of RT #1 [1, 788] RVT-GII Feature: gene Location: 1-147 bp Feature: gene Location: 198-461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 207-393 bp Feature: gene Location: 543-788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AFWC01000007.1 Escherichia coli O104:H4 str. H112180283 CS7, whole genome shotgun sequence (71688 bp)
Overview 1 RT 1: 65591-68819 bp Neighborhood of RT #1 [65591, 68819] InsE PHA02517 RVT-GII group_II_RT_mat Feature: gene Location: 65591-65893 bp Feature: domain Description: InsE Location: 65630-65879 bp Feature: domain Description: InsE Location: 65630-65879 bp Feature: gene Location: 65949-66374 bp Feature: domain Description: PHA02517 Location: 65973-66309 bp Feature: domain Description: PHA02 517 Location: 65973-66309 bp Feature: gene Location: 66966-67904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67239-67695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 672 39-67695 bp Feature: gene Location: 67919-68260 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 67925-68237 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 6792 5-682 37 bp Feature: gene Location: 68685-68819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, group_II_RT_mat (TIGR04416)

Seq: AFWC01000001.1 Escherichia coli O104:H4 str. H112180283 CS1, whole genome shotgun sequence (17265 bp)
Overview 1 RT 1: 14531-17019 bp Neighborhood of RT #1 [14531, 17264] TonB-siderophor PHA02517 RVT-GII GIIM Feature: gene Location: 14531-15262 bp Feature: domain Description: TonB-siderophor Location: 14552-15260 bp Feature: domain Description: TonB-siderophor Location: 14552-15260 bp Feature: gene Location: 15664-16110 bp Feature: domain Description: PHA02517 Location: 15667-16108 bp Feature: domain Description: PHA02517 Location: 15667-16108 bp Feature: gene Location: 16227-17264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16230-16746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1623 0-16746 bp Feature: domain Description: GIIM Note: maturase Location: 16821-17019 bp Feature: domain Description: GIIM Note: maturase Location: 16821-17019 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TonB-siderophor (TIGR01783), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)