myRT

myRT report for GCA_000222605.2_ASM22260v1

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Seq: AFWF01000259.1 Vibrio ichthyoenteri ATCC 700023 VII00023_42, whole genome shotgun sequence (2166 bp)
Overview 1 RT 1: 117-1365 bp Neighborhood of RT #1 [117, 1589] RVT_N RVT-GII GIIM Feature: gene Location: 117-1589 bp Feature: RT Description: RVT_N Location: 165-408 bp Feature: RT Description: RVT_N Location: 1 65-408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453-1080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453-1 080 bp Feature: domain Description: GIIM Note: maturase Location: 1140-1365 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 40-1 365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: AFWF01000003.1 Vibrio ichthyoenteri ATCC 700023 VII00023_100, whole genome shotgun sequence (100743 bp)
Overview 1 RT 1: 98074-100702 bp Neighborhood of RT #1 [98074, 100719] PinE RVT-Retrons CSP_CDS Feature: gene Location: 98074-98655 bp Feature: domain Description: PinE Location: 98077-98641 bp Feature: domain Description: PinE Location: 98077-98641 bp Feature: gene Location: 99053-99259 bp Feature: gene Location: 99313-100500 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 99466-100030 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 99466-100030 bp Feature: gene Location: 100501-100719 bp Feature: domain Description: CSP_CDS Location: 100516-100702 bp Feature: domain Description: CSP_CDS Location: 100516-100702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CSP_CDS (cd04458), PinE (COG1961), RVT-Retrons