myRT

myRT report for GCA_000225525.2_ASM22552v1

Download annotations/find similar RTs

Seq: AGBF01000006.1 Streptomyces zinciresistens K42 contig00006, whole genome shotgun sequence (118719 bp)
Overview 1 RT 1: 44189-48811 bp Neighborhood of RT #1 [44189, 48846] ADP_ribosyl_GH His_Phos_1 RVT-GII group_II_RT_mat DUF4937 DUF4937 TerD_like Feature: gene Location: 44189-45094 bp Ori: EGX61180.1 Feature: domain Description: ADP_ribosyl_GH Location: 44240-45017 bp Feature: domain Description: ADP_ribosyl_GH Location: 44240-4501 7 bp Feature: gene Location: 45107-45622 bp Ori: EGX61181.1 Feature: domain Description: His_Phos_1 Location: 45140-45557 bp Feature: domain Description: His_Phos_1 Location: 451 40-45557 bp Feature: gene Location: 45874-46506 bp Ori: EGX61182.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45877-46063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45877-46063 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 46093-46396 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 46093-46396 bp Feature: gene Location: 47539-48009 bp Ori: EGX61183.1 Feature: domain Description: DUF4937 Location: 47545-47662 bp Feature: domain Description: DUF4937 Location: 47545-47662 bp Feature: domain Description: DUF4937 Location: 47719-47947 bp Feature: domain Description: DUF4937 Location: 4771 9-47947 bp Feature: gene Location: 48313-48846 bp Ori: EGX61184.1 Feature: domain Description: TerD_like Location: 48340-48811 bp Feature: domain Description: TerD_like Location: 48340-4881 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ADP_ribosyl_GH (pfam03747), His_Phos_1 (pfam00300), RVT-GII, group_II_RT_mat (TIGR04416), DUF4937 (pfam16291), TerD_like (cl18957)

Seq: AGBF01000245.1 Streptomyces zinciresistens K42 contig00245, whole genome shotgun sequence (8419 bp)
Overview 1 RT 1: 2073-7732 bp Neighborhood of RT #1 [2073, 7749] DDE_Tnp_Tn3 Nterm_IS4 DDE_Tnp_1 RVT_N RVT-GII GIIM HTH_Tnp_4 DDE_Tnp_4 Feature: gene Location: 2073-2294 bp Ori: EGX55278.1 Feature: domain Description: DDE_Tnp_Tn3 Location: 2076-2223 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 2 076-2 2 2 3 bp Feature: gene Location: 2440-3435 bp Ori: EGX55279.1 Feature: domain Description: Nterm_IS4 Location: 2503-2779 bp Feature: domain Description: Nterm_IS4 Location: 2 503-2 779 bp Feature: domain Description: DDE_Tnp_1 Location: 2833-3367 bp Feature: domain Description: DDE_Tnp_1 Location: 2 833-3367 bp Feature: gene Location: 4057-5802 bp Ori: EGX55280.1 Feature: domain Description: RVT_N Location: 4126-4363 bp Feature: domain Description: RVT_N Location: 412 6-4363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4423-5080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442 3-5080 bp Feature: domain Description: GIIM Note: maturase Location: 5134-5365 bp Feature: domain Description: GIIM Note: maturase Location: 5134-5365 bp Feature: gene Location: 6049-6351 bp Feature: gene Location: 6985-7749 bp Ori: EGX55282.1 Feature: domain Description: HTH_Tnp_4 Location: 7087-7237 bp Feature: domain Description: HTH_Tnp_4 Location: 7087-72 37 bp Feature: domain Description: DDE_Tnp_4 Location: 7291-7732 bp Feature: domain Description: DDE_Tnp_4 Location: 72 91-7732 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_Tn3 (pfam01526), Nterm_IS4 (pfam13006), DDE_Tnp_1 (pfam01609), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_Tnp_4 (pfam13613), DDE_Tnp_4 (pfam13359)

Seq: AGBF01000301.1 Streptomyces zinciresistens K42 contig00301, whole genome shotgun sequence (5667 bp)
Overview 1 RT 1: 86-3843 bp Neighborhood of RT #1 [86, 3923] RVT-GII GIIM HTH_Tnp_1 TniQ HA HA Feature: gene Location: 86-1339 bp Ori: EGX54901.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302-962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 02-962 bp Feature: domain Description: GIIM Note: maturase Location: 1040-1274 bp Feature: domain Description: GIIM Note: maturase Location: 1040-1274 bp Feature: gene Location: 1907-2299 bp Ori: EGX54902.1 Feature: domain Description: HTH_Tnp_1 Location: 1964-2201 bp Feature: domain Description: HTH_Tnp_1 Location: 1964-2201 bp Feature: gene Location: 2367-3923 bp Ori: EGX54903.1 Feature: domain Description: TniQ Location: 2388-2814 bp Feature: domain Description: TniQ Location: 23 88-2814 bp Feature: domain Description: HA Location: 3465-3642 bp Feature: domain Description: HA Location: 3 465-3 642 bp Feature: domain Description: HA Location: 3672-3843 bp Feature: domain Description: HA Location: 3 672-3 843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_Tnp_1 (pfam01527), TniQ (pfam06527), HA (pfam03457)