myRT

myRT report for GCA_000225805.1_ASM22580v1

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Seq: JH137604.1 Pseudomonas syringae pv. phaseolicola 1644R genomic scaffold Scaffold_144, whole genome shotgun sequence (15843 bp)
Overview 1 RT 1: 71-2591 bp Neighborhood of RT #1 [71, 2614] RVT-GII GIIM S24_LexA-like Feature: gene Location: 71-1339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275-932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275-932 bp Feature: domain Description: GIIM Note: maturase Location: 1010-1232 bp Feature: domain Description: GIIM Note: maturase Location: 1 01 0-1 232 bp Feature: gene Location: 2032-2295 bp Feature: gene Location: 2363-2614 bp Feature: domain Description: S24_LexA-like Location: 2393-2591 bp Feature: domain Description: S24_LexA-like Location: 2393-2591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), S24_LexA-like (cd06529)

Seq: JH137640.1 Pseudomonas syringae pv. phaseolicola 1644R genomic scaffold Scaffold_203, whole genome shotgun sequence (36391 bp)
Overview 1 RT 1: 33239-35875 bp Neighborhood of RT #1 [33239, 35970] PRK13877 RVT-Retrons Trypsin_2 Feature: gene Location: 33239-33760 bp Feature: domain Description: PRK13877 Location: 33401-33716 bp Feature: domain Description: PRK13877 Location: 33401-33716 bp Feature: gene Location: 33727-34041 bp Feature: gene Location: 34294-35970 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34441-35062 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34441-35062 bp Feature: domain Description: Trypsin_2 Location: 35455-35875 bp Feature: domain Description: Trypsin_2 Location: 35455-35875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13877 (conjugal transfer transcriptional regulator TraJ), RVT-Retrons, Trypsin_2 (pfam13365)

Seq: AGAS01000670.1 Pseudomonas savastanoi pv. phaseolicola 1644R contig665.1, whole genome shotgun sequence (1445 bp)
Overview 1 RT 1: 1-1442 bp Neighborhood of RT #1 [1, 1442] RVT-UG9 Feature: gene Location: 1-1086 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 412-1051 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 412-1051 bp Feature: gene Location: 1158-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG9

Seq: AGAS01000712.1 Pseudomonas savastanoi pv. phaseolicola 1644R contig707.1, whole genome shotgun sequence (1924 bp)
Overview 1 RT 1: 10-1922 bp Neighborhood of RT #1 [10, 1922] RVT-UG8 Feature: gene Location: 10-1125 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 25-397 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 25-397 bp Feature: gene Location: 1103-1690 bp Feature: gene Location: 1677-1922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8

Seq: AGAS01000876.1 Pseudomonas savastanoi pv. phaseolicola 1644R contig871.1, whole genome shotgun sequence (4467 bp)
Overview 1 RT 1: 8-3924 bp Neighborhood of RT #1 [8, 3965] RVT-UG3 RVT-UG17 SLATT_5 Feature: gene Location: 8-1036 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 296-764 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 296-764 bp Feature: gene Location: 1424-1585 bp Feature: gene Location: 1847-2017 bp Feature: gene Location: 2062-3426 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2290-2893 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2290-2893 bp Feature: gene Location: 3423-3965 bp Feature: domain Description: SLATT_5 Location: 3429-3924 bp Feature: domain Description: SLATT_5 Location: 3429-3924 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3, RVT-UG17, SLATT_5 (pfam18160)