myRT

myRT report for GCA_000226215.2_ASM22621v2

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Seq: AGFF01000021.1 Dietzia alimentaria 72 contig021, whole genome shotgun sequence (52037 bp)
Overview 1 RT 1: 1964-6033 bp Neighborhood of RT #1 [1964, 6083] RVT_N RVT-GII GIIM DDE_Tnp_1 IstB_IS21 Feature: gene Location: 1964-2647 bp Feature: gene Location: 2699-2965 bp Feature: gene Location: 3274-4842 bp Feature: RT Description: RVT_N Location: 3361-3598 bp Feature: RT Description: RVT_N Location: 3361 -3598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3658-4315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3658-431 5 bp Feature: domain Description: GIIM Note: maturase Location: 4372-4606 bp Feature: domain Description: GIIM Note: maturase Location: 4372-4606 bp Feature: gene Location: 4926-5735 bp Feature: domain Description: DDE_Tnp_1 Location: 4959-5562 bp Feature: domain Description: DDE_Tnp_1 Location: 4959-5562 bp Feature: gene Location: 5739-6083 bp Feature: domain Description: IstB_IS21 Location: 5805-6033 bp Feature: domain Description: IstB_IS21 Location: 5805-6033 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609), IstB_IS21 (pfam01695)

Seq: AGFF01000003.1 Dietzia alimentaria 72 contig003, whole genome shotgun sequence (216003 bp)
Overview 1 RT 1: 171281-177405 bp Neighborhood of RT #1 [171281, 177405] PinE RVT-Retrons Feature: gene Location: 171281-172255 bp Feature: gene Location: 172333-173034 bp Feature: domain Description: PinE Location: 172411-172969 bp Feature: domain Description: PinE Location: 172 411-172 969 bp Feature: gene Location: 173601-174872 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 174030-174636 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 174030-174636 bp Feature: gene Location: 175742-176485 bp Feature: gene Location: 176707-177405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-Retrons