myRT

myRT report for GCA_000226415.1_ASM22641v1

Download annotations/find similar RTs

Seq: JH159258.1 Streptomyces lysosuperificus ATCC 31396 genomic scaffold 31396_Doro1_scaffold26, whole genome shotgun sequence (18526 bp)
Overview 1 RT 1: 2163-6672 bp Neighborhood of RT #1 [2163, 6672] TIR-like RVT-Retrons Feature: gene Location: 2163-3071 bp Feature: domain Description: TIR-like Location: 2208-2595 bp Feature: domain Description: TIR-like Location: 2208-2595 bp Feature: gene Location: 3073-3537 bp Feature: gene Location: 3700-4566 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3709-4270 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3709-4270 bp Feature: gene Location: 5018-6256 bp Feature: gene Location: 6502-6672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIR-like (pfam10137), RVT-Retrons

Seq: JH159287.1 Streptomyces lysosuperificus ATCC 31396 genomic scaffold 31396_Doro1_scaffold55, whole genome shotgun sequence (11465 bp)
Overview 1 RT 1: 2-3442 bp Neighborhood of RT #1 [2, 3442] PTPS RVT-CRISPR-like pfam03781 Feature: gene Location: 2-283 bp Feature: domain Description: PTPS Location: 5-272 bp Feature: domain Description: PTPS Location: 5-2 72 bp Feature: gene Location: 1140-1271 bp Feature: gene Location: 1429-2211 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1648-2179 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1648-2 179 bp Feature: gene Location: 2217-2792 bp Feature: domain Description: pfam03781 Location: 2334-2784 bp Feature: domain Description: pfam03781 Location: 2 334-2 784 bp Feature: gene Location: 2789-3442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PTPS (pfam01242), RVT-CRISPR, pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)