myRT

myRT report for GCA_000232445.2_ASM23244v2

Download annotations/find similar RTs

Seq: AGOT01000001.1 Streptococcus pneumoniae GA07643 GA07643.contig.0, whole genome shotgun sequence (1168444 bp)
Overview 1 RT 1: 192490-198183 bp Neighborhood of RT #1 [192490, 198191] RimL Acetyltransf_10 RVT-GII RVT-GII RuvB COG3575 Feature: gene Location: 192490-193185 bp Feature: domain Description: RimL Location: 192613-193105 bp Feature: domain Description: RimL Location: 1 9261 3-1 931 05 bp Feature: gene Location: 193197-193613 bp Feature: domain Description: Acetyltransf_10 Location: 193275-193566 bp Feature: domain Description: Acetyltransf_1 0 Location: 1 93275-1 93566 bp Feature: gene Location: 194406-194819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194610-194817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9461 0-1 9481 7 bp Feature: gene Location: 194804-195253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194819-195182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9481 9-1 951 82 bp Feature: gene Location: 196667-197638 bp Feature: domain Description: RuvB Location: 196679-197633 bp Feature: domain Description: RuvB Location: 1 96679-1 97633 bp Feature: gene Location: 197619-198191 bp Feature: domain Description: COG3575 Location: 197634-198183 bp Feature: domain Description: COG3575 Location: 1 97634-1 981 83 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), Acetyltransf_10 (pfam13673), RVT-GII, RuvB (COG2255), COG3575 (Uncharacterized protein )

Seq: AGOT01000005.1 Streptococcus pneumoniae GA07643 GA07643.contig.4, whole genome shotgun sequence (203735 bp)
Overview 1 RT 1: 123848-129128 bp Neighborhood of RT #1 [123848, 129128] DUF3687 MFS_MefA_like RVT-GII RVT-GII Feature: gene Location: 123848-123979 bp Feature: domain Description: DUF3687 Location: 123860-123977 bp Feature: domain Description: DUF3687 Location: 12 3860-12 3977 bp Feature: gene Location: 124293-125198 bp Feature: domain Description: MFS_MefA_like Location: 124302-125178 bp Feature: domain Description: MFS_MefA_like Location: 12 4302 -12 5178 bp Feature: gene Location: 126336-126785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126351-126714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 6351-12 6714 bp Feature: gene Location: 126770-127183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126974-127181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 6974-12 7181 bp Feature: gene Location: 128251-128838 bp Feature: gene Location: 128925-129128 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3687 (pfam12459), MFS_MefA_like (cd06173), RVT-GII