myRT

myRT report for GCA_000232945.2_ASM23294v2

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Seq: AGPS01000003.1 Streptococcus pneumoniae GA47360 GA47360.contig.2, whole genome shotgun sequence (434790 bp)
Overview 1 RT 1: 219079-224773 bp Neighborhood of RT #1 [219079, 224781] RimL Acetyltransf_10 RVT-GII RVT-GII RuvB COG3575 Feature: gene Location: 219079-219774 bp Feature: domain Description: RimL Location: 219202-219694 bp Feature: domain Description: RimL Location: 21 9202-21 9694 bp Feature: gene Location: 219786-220202 bp Feature: domain Description: Acetyltransf_10 Location: 219864-220155 bp Feature: domain Description: Acetyltransf_1 0 Location: 21 9864-2201 55 bp Feature: gene Location: 220995-221408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221199-221406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221 1 99-221 406 bp Feature: gene Location: 221495-221842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221498-221771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221 498-221 771 bp Feature: gene Location: 223230-224228 bp Feature: domain Description: RuvB Location: 223236-224223 bp Feature: domain Description: RuvB Location: 223236-224223 bp Feature: gene Location: 224209-224781 bp Feature: domain Description: COG3575 Location: 224224-224773 bp Feature: domain Description: COG3575 Location: 224224-224773 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), Acetyltransf_10 (pfam13673), RVT-GII, RuvB (COG2255), COG3575 (Uncharacterized protein )

Seq: AGPS01000016.1 Streptococcus pneumoniae GA47360 GA47360.contig.15, whole genome shotgun sequence (210478 bp)
Overview 1 RT 1: 124030-130728 bp Neighborhood of RT #1 [124030, 130728] DUF3687 MFS_MefA_like RVT-GII RVT-GII DDE_Tnp_1_4 Feature: gene Location: 124030-124161 bp Feature: domain Description: DUF3687 Location: 124042-124159 bp Feature: domain Description: DUF3687 Location: 12 4042 -12 4159 bp Feature: gene Location: 124475-125653 bp Feature: domain Description: MFS_MefA_like Location: 124490-125633 bp Feature: domain Description: MFS_MefA_like Location: 12 4490-12 5633 bp Feature: gene Location: 126518-126865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126521-126794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 652 1-12 6794 bp Feature: gene Location: 126952-127365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127156-127363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 7156-12 7363 bp Feature: gene Location: 128256-129602 bp Feature: domain Description: DDE_Tnp_1_4 Location: 128304-129543 bp Feature: domain Description: DDE_Tnp_1_4 Location: 12 8304-12 9543 bp Feature: gene Location: 130141-130728 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3687 (pfam12459), MFS_MefA_like (cd06173), RVT-GII, DDE_Tnp_1_4 (pfam13701)