myRT

myRT report for GCA_000234275.3_ASM23427v3

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Seq: AGTJ01000193.1 Escherichia coli O121:H19 str. MT#2 EC1660_contig_193, whole genome shotgun sequence (2043 bp)
Overview 1 RT 1: 146-1872 bp Neighborhood of RT #1 [146, 1898] DUF932 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 146-532 bp Feature: domain Description: DUF932 Location: 152-497 bp Feature: domain Description: DUF932 Location: 1 52-497 bp Feature: gene Location: 705-1898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708-1176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 708-1 1 76 bp Feature: domain Description: Intron_maturas2 Location: 1302-1527 bp Feature: domain Description: Intron_maturas2 Location: 1 302-1 527 bp Feature: domain Description: HNHc Note: nucleases Location: 1722-1872 bp Feature: domain Description: HNHc Note: nucleases Location: 1 722-1 872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: AGTJ01000060.1 Escherichia coli O121:H19 str. MT#2 EC1660_contig_60, whole genome shotgun sequence (5070 bp)
Overview 1 RT 1: 56-2115 bp Neighborhood of RT #1 [56, 2115] RVT-GII DUF932 Feature: gene Location: 56-592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 317-575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 317-575 bp Feature: gene Location: 1084-1485 bp Feature: domain Description: DUF932 Location: 1195-1477 bp Feature: domain Description: DUF932 Location: 1195-1477 bp Feature: gene Location: 1705-2115 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII