myRT

myRT report for GCA_000235045.1_Esch_coli_11-4632_C5_V2

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Seq: JH377981.1 Escherichia coli O104:H4 str. 11-4632 C5 genomic scaffold supercont1.2, whole genome shotgun sequence (1088857 bp)
Overview 1 RT 1: 6715-13595 bp Neighborhood of RT #1 [6715, 13648] PHA02517 RVT-GII GIIM PHA02517 VI_ClpV1 Feature: gene Location: 6715-6864 bp Feature: gene Location: 7421-7807 bp Feature: domain Description: PHA02517 Location: 7424-7805 bp Feature: domain Description: PHA0251 7 Location: 7424-7805 bp Feature: gene Location: 7984-9507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8257-8989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8257-8989 bp Feature: domain Description: GIIM Note: maturase Location: 9064-9262 bp Feature: domain Description: GIIM Note: maturase Location: 9064-9262 bp Feature: gene Location: 10099-10662 bp Feature: domain Description: PHA02517 Location: 10243-10597 bp Feature: domain Description: PHA0251 7 Location: 1 0243-1 0597 bp Feature: gene Location: 11099-13648 bp Feature: domain Description: VI_ClpV1 Location: 11135-13595 bp Feature: domain Description: VI_ClpV1 Location: 1 1 1 35-1 3595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), VI_ClpV1 (TIGR03345), RVT-GII, GIIM (pfam08388)

Seq: JH377984.1 Escherichia coli O104:H4 str. 11-4632 C5 genomic scaffold supercont1.5, whole genome shotgun sequence (3844590 bp)
Overview 1 RT 1: 10676-15849 bp 2 RT 2: 208201-213330 bp Neighborhood of RT #1 [10676, 15851] TonB-siderophor PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [208201, 213332] InsE PHA02517 RVT-GII GIIM fecE Feature: gene Location: 10676-12874 bp Feature: domain Description: TonB-siderophor Location: 10811-12872 bp Feature: domain Description: TonB-siderophor Location: 10811-12 872 bp Feature: gene Location: 13276-13647 bp Feature: domain Description: PHA02517 Location: 13279-13645 bp Feature: domain Description: PHA02 517 Location: 132 79-13645 bp Feature: gene Location: 13839-15167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13917-14649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13917-14649 bp Feature: domain Description: GIIM Note: maturase Location: 14724-14922 bp Feature: domain Description: GIIM Note: maturase Location: 1472 4-1492 2 bp Feature: gene Location: 15268-15525 bp Feature: domain Description: PHA02517 Location: 15328-15526 bp Feature: domain Description: PHA02 517 Location: 1532 8-1552 6 bp Feature: gene Location: 15525-15851 bp Feature: domain Description: InsE Location: 15528-15849 bp Feature: domain Description: InsE Location: 1552 8-15849 bp Feature: gene Location: 208201-208503 bp Feature: domain Description: InsE Location: 208240-208489 bp Feature: domain Description: InsE Location: 2 082 40-2 08489 bp Feature: gene Location: 208745-208984 bp Feature: domain Description: PHA02517 Location: 208748-208919 bp Feature: domain Description: PHA02 517 Location: 2 08748-2 08919 bp Feature: gene Location: 209576-211099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 209849-210581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 09849-2 10581 bp Feature: domain Description: GIIM Note: maturase Location: 210656-210854 bp Feature: domain Description: GIIM Note: maturase Location: 2 10656-2 10854 bp Feature: gene Location: 211750-212007 bp Feature: gene Location: 212565-213332 bp Feature: domain Description: fecE Location: 212568-213330 bp Feature: domain Description: fecE Location: 2 12 568-2 13330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TonB-siderophor (TIGR01783), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), fecE (PRK11231)

Seq: JH377983.1 Escherichia coli O104:H4 str. 11-4632 C5 genomic scaffold supercont1.4, whole genome shotgun sequence (6786 bp)
Overview 1 RT 1: 1-6173 bp Neighborhood of RT #1 [1, 6175] RVT-GII GIIM PHA02517 Peptidase_S6 autotrans_barl Feature: gene Location: 1-1329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79-811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79-811 bp Feature: domain Description: GIIM Note: maturase Location: 886-1084 bp Feature: domain Description: GIIM Note: maturase Location: 886-1084 bp Feature: gene Location: 1506-1892 bp Feature: domain Description: PHA02517 Location: 1509-1890 bp Feature: domain Description: PHA02517 Location: 1509-1890 bp Feature: gene Location: 2057-6175 bp Feature: domain Description: Peptidase_S6 Location: 2210-4382 bp Feature: domain Description: Peptidase_S6 Location: 2210-43 82 bp Feature: domain Description: autotrans_barl Location: 4946-6173 bp Feature: domain Description: autotrans_barl Location: 4946-6173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), Peptidase_S6 (pfam02395), autotrans_barl (TIGR01414)