myRT

myRT report for GCA_000235725.2_ASM23572v1

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Seq: AGIB01000052.1 Halomonas sp. HAL1 contig00054, whole genome shotgun sequence (1850 bp)
Overview 1 RT 1: 1-1850 bp Neighborhood of RT #1 [1, 1850] RVT-GII GIIM Feature: gene Location: 1-96 bp Feature: gene Location: 91-1458 bp Ori: EHA15325.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 424-1036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 424-1 036 bp Feature: domain Description: GIIM Note: maturase Location: 1099-1318 bp Feature: domain Description: GIIM Note: maturase Location: 1 099-1 31 8 bp Feature: gene Location: 1628-1850 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AGIB01000088.1 Halomonas sp. HAL1 contig00101, whole genome shotgun sequence (215402 bp)
Overview 1 RT 1: 1-2634 bp Neighborhood of RT #1 [1, 2634] RVT-UG12 Feature: gene Location: 1-981 bp Ori: EHA13679.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 328-775 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 32 8-775 bp Feature: gene Location: 1090-2253 bp Feature: gene Location: 2257-2634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12

Seq: AGIB01000002.1 Halomonas sp. HAL1 contig00002, whole genome shotgun sequence (58325 bp)
Overview 1 RT 1: 3590-9570 bp Neighborhood of RT #1 [3590, 9578] OYE_YqiM_FMN MmlI MmlI RVT-GII GIIM Ga5DH-like_SDR_c Feature: gene Location: 3590-4672 bp Ori: EHA17524.1 Feature: domain Description: OYE_YqiM_FMN Location: 3596-4568 bp Feature: domain Description: OYE_YqiM_FMN Location: 3 596-4568 bp Feature: gene Location: 4701-5396 bp Ori: EHA17525.1 Feature: domain Description: MmlI Location: 4704-4959 bp Feature: domain Description: MmlI Location: 4704-4959 bp Feature: domain Description: MmlI Location: 5064-5394 bp Feature: domain Description: MmlI Location: 5064-53 94 bp Feature: gene Location: 5929-7317 bp Ori: EHA17526.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6253-6871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6253 -6871 bp Feature: domain Description: GIIM Note: maturase Location: 6919-7147 bp Feature: domain Description: GIIM Note: maturase Location: 6919-7147 bp Feature: gene Location: 7856-8056 bp Feature: gene Location: 8832-9578 bp Ori: EHA17528.1 Feature: domain Description: Ga5DH-like_SDR_c Location: 8838-9570 bp Feature: domain Description: Ga5DH-like_SDR_c Location: 883 8-9570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OYE_YqiM_FMN (cd02932), MmlI (pfam09448), RVT-GII, GIIM (pfam08388), Ga5DH-like_SDR_c (cd05347)