myRT

myRT report for GCA_000238035.1_ASM23803v1

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Seq: JH414490.1 Desulfitobacterium hafniense DP7 genomic scaffold Scfld684, whole genome shotgun sequence (14624 bp)
Overview 1 RT 1: 1-4968 bp Neighborhood of RT #1 [1, 5087] RVT-UG7 Cas5_I-B Cas_Cas7 Feature: gene Location: 1-138 bp Feature: gene Location: 1749-3320 bp Ori: EHL04718.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2166-2556 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 21 66-2556 bp Feature: gene Location: 3387-4082 bp Ori: EHL04719.1 Feature: domain Description: Cas5_I-B Location: 3399-3762 bp Feature: domain Description: Cas5_I-B Location: 3399-3762 bp Feature: gene Location: 4122-5087 bp Ori: EHL04720.1 Feature: domain Description: Cas_Cas7 Location: 4149-4968 bp Feature: domain Description: Cas_Cas7 Location: 41 49-4968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, Cas5_I-B (cd09692), Cas_Cas7 (pfam05107)

Seq: JH414472.1 Desulfitobacterium hafniense DP7 genomic scaffold Scfld286, whole genome shotgun sequence (100836 bp)
Overview 1 RT 1: 62834-66964 bp Neighborhood of RT #1 [62834, 66964] KOG4404 YcxB RVT-GII Intron_maturas2 Feature: gene Location: 62834-63100 bp Feature: gene Location: 63158-63727 bp Ori: EHL06715.1 Feature: domain Description: KOG4404 Location: 63206-63311 bp Feature: domain Description: KOG4404 Location: 632 06-63311 bp Feature: domain Description: YcxB Location: 63515-63686 bp Feature: domain Description: YcxB Location: 63515-63686 bp Feature: gene Location: 63829-65604 bp Ori: EHL06716.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64102-64894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64102 -64894 bp Feature: domain Description: Intron_maturas2 Location: 64975-65266 bp Feature: domain Description: Intron_maturas2 Location: 64975-652 66 bp Feature: gene Location: 65869-65988 bp Feature: gene Location: 66110-66964 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG4404 (KOG4404, Tandem pore domain K+ channel TASK3/THIK-1 ), YcxB (pfam14317), RVT-GII, Intron_maturas2 (pfam01348)

Seq: JH414446.1 Desulfitobacterium hafniense DP7 genomic scaffold Scfld35, whole genome shotgun sequence (1938 bp)
Overview 1 RT 1: 408-1656 bp Neighborhood of RT #1 [408, 1817] RVT-GII GIIM Feature: gene Location: 408-1817 bp Ori: EHL08701.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-1380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 762-13 80 bp Feature: domain Description: GIIM Note: maturase Location: 1431-1656 bp Feature: domain Description: GIIM Note: maturase Location: 143 1-1656 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)