myRT

myRT report for GCA_000238375.3_Pcit_2.0

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Seq: AHBZ02000183.1 Pseudoalteromonas citrea DSM 8771 strain NCIMB 1889 contig183, whole genome shotgun sequence (1684 bp)
Overview 1 RT 1: 296-1460 bp Neighborhood of RT #1 [296, 1651] RVT-GII GIIM Feature: gene Location: 296-1651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 590-1214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 590-1 21 4 bp Feature: domain Description: GIIM Note: maturase Location: 1253-1460 bp Feature: domain Description: GIIM Note: maturase Location: 1 253-1 460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AHBZ02000060.1 Pseudoalteromonas citrea DSM 8771 strain NCIMB 1889 contig060, whole genome shotgun sequence (31152 bp)
Overview 1 RT 1: 23184-29548 bp Neighborhood of RT #1 [23184, 29565] XerC RVT-Retrons AAA_15 Arm-DNA-bind_3 Phage_int_SAM_3 INT_P4_C Feature: gene Location: 23184-24065 bp Feature: domain Description: XerC Location: 23271-24030 bp Feature: domain Description: XerC Location: 2 32 71-2 4030 bp Feature: gene Location: 24077-24961 bp Feature: gene Location: 24963-25991 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 25107-25602 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 5107-2 5602 bp Feature: gene Location: 26123-28231 bp Feature: domain Description: AAA_15 Location: 26126-27119 bp Feature: domain Description: AAA_15 Location: 2 612 6-2 7119 bp Feature: gene Location: 28303-29565 bp Feature: domain Description: Arm-DNA-bind_3 Location: 28327-28603 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2 832 7-2 8603 bp Feature: domain Description: Phage_int_SAM_3 Location: 28717-28786 bp Feature: domain Description: Phage_int_SAM_3 Location: 2 8717-2 8786 bp Feature: domain Description: INT_P4_C Location: 28975-29548 bp Feature: domain Description: INT_P4_C Location: 2 8975-2 9548 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XerC (COG4973), RVT-Retrons, AAA_15 (pfam13175), Arm-DNA-bind_3 (pfam13356), Phage_int_SAM_3 (pfam14659), INT_P4_C (cd00801)