myRT

myRT report for GCA_000241165.2_PspBSi20439_1.0

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Seq: BADW01000072.1 Pseudoalteromonas sp. BSi20439 DNA, contig: CTG072, whole genome shotgun sequence (18042 bp)
Overview 1 RT 1: 8081-17192 bp Neighborhood of RT #1 [8081, 17293] RMtype1_S_BamJRS5ORF1993P-TRD1-CR1_like RMtype1_S_BamJRS5ORF1993P-TRD1-CR1_like RVT-UG15 hsdR COG0610 DUF1837 Feature: gene Location: 8081-9394 bp Ori: GAA71328.1 Gene: hsdS Feature: domain Description: RMtype1_S_BamJRS5ORF1993P-TRD1-CR1_like Location: 8096-8669 bp Feature: domain Description: RMtype1 _S_BamJRS5ORF1 993P-TRD1 -CR1 _like Location: 8096-8669 bp Feature: domain Description: RMtype1_S_BamJRS5ORF1993P-TRD1-CR1_like Location: 9014-9347 bp Feature: domain Description: RMtype1 _S_BamJRS5ORF1 993P-TRD1 -CR1 _like Location: 901 4-9347 bp Feature: gene Location: 9395-11509 bp Feature: gene Location: 11506-13146 bp Ori: GAA71330.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 11932-12340 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 1 1 932-1 2340 bp Feature: gene Location: 13172-16444 bp Ori: GAA71331.1 Gene: hsdR Feature: domain Description: hsdR Location: 13187-13532 bp Feature: domain Description: hsdR Location: 1 31 87-1 3532 bp Feature: domain Description: COG0610 Location: 13634-16130 bp Feature: domain Description: COG061 0 Location: 1 3634-1 61 30 bp Feature: gene Location: 16463-17293 bp Ori: GAA71332.1 Feature: domain Description: DUF1837 Location: 16622-17192 bp Feature: domain Description: DUF1 837 Location: 1 6622-1 71 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_BamJRS5ORF1993P-TRD1-CR1_like (cd17289), RVT-UG15, hsdR (TIGR00348), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), DUF1837 (pfam08878)

Seq: BADW01000042.1 Pseudoalteromonas sp. BSi20439 DNA, contig: CTG042, whole genome shotgun sequence (2279 bp)
Overview 1 RT 1: 93-1371 bp Neighborhood of RT #1 [93, 1616] RVT-GII GIIM Feature: gene Location: 93-1616 bp Ori: GAA70632.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1170-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1170-1371 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)