myRT

myRT report for GCA_000242135.1_Myro_odor_CIP_101113_V1

Download annotations/find similar RTs

Seq: JH590837.1 Myroides odoratimimus CIP 101113 genomic scaffold supercont1.1, whole genome shotgun sequence (2491923 bp)
Overview 1 RT 1: 499464-505829 bp 2 RT 2: 1661203-1673716 bp Neighborhood of RT #1 [499464, 505829] TonB_C RVT-UG5 PT_UbiA_2 Neighborhood of RT #2 [1661203, 1673769] DUF4133 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G DUF4141 Bac_Flav_CT_M Bac_Flav_CT_N RVT-UG12 Tra5 HTH_Tnp_1 Feature: gene Location: 499464-499850 bp Feature: gene Location: 500046-500480 bp Ori: EHO14581.1 Feature: domain Description: TonB_C Location: 500280-500460 bp Feature: domain Description: TonB_C Location: 500280-500460 bp Feature: gene Location: 501107-504358 bp Ori: EHO14582.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 501620-502163 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 501 620-5021 63 bp Feature: gene Location: 504368-505036 bp Ori: EHO14583.1 Feature: domain Description: PT_UbiA_2 Location: 504755-504971 bp Feature: domain Description: PT_UbiA_2 Location: 504755-504971 bp Feature: gene Location: 505131-505829 bp Feature: gene Location: 1661203-1661547 bp Ori: EHO13066.1 Feature: domain Description: DUF4133 Location: 1661221-1661488 bp Feature: domain Description: DUF41 33 Location: 1 661 221 -1 661 488 bp Feature: gene Location: 1661531-1663465 bp Ori: EHO13067.1 Feature: domain Description: Bac_Flav_CT_G Location: 1661534-1663448 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 661 534-1 663448 bp Feature: gene Location: 1664032-1665843 bp Ori: EHO13068.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1664296-1665118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 664296-1 6651 1 8 bp Feature: domain Description: Intron_maturas2 Location: 1665220-1665580 bp Feature: domain Description: Intron_maturas2 Location: 1 665220-1 665580 bp Feature: domain Description: HNHc Note: nucleases Location: 1665667-1665814 bp Feature: domain Description: HNHc Note: nucleases Location: 1 665667-1 66581 4 bp Feature: gene Location: 1665851-1666528 bp Ori: EHO13069.1 Feature: domain Description: Bac_Flav_CT_G Location: 1665953-1666520 bp Feature: domain Description: Bac_Flav_CT_G Location: 1 665953-1 666520 bp Feature: gene Location: 1666558-1667190 bp Ori: EHO13070.1 Feature: domain Description: DUF4141 Location: 1666579-1666729 bp Feature: domain Description: DUF41 41 Location: 1 666579-1 666729 bp Feature: gene Location: 1669096-1670382 bp Ori: EHO13073.1 Feature: domain Description: Bac_Flav_CT_M Location: 1669180-1670377 bp Feature: domain Description: Bac_Flav_CT_M Location: 1 6691 80-1 670377 bp Feature: gene Location: 1670412-1671284 bp Ori: EHO13074.1 Feature: domain Description: Bac_Flav_CT_N Location: 1670415-1671261 bp Feature: domain Description: Bac_Flav_CT_N Location: 1 67041 5-1 671 261 bp Feature: gene Location: 1671521-1672639 bp Ori: EHO13075.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1671944-1672442 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 1 671 944-1 672442 bp Feature: gene Location: 1672625-1673407 bp Ori: EHO13076.1 Feature: domain Description: Tra5 Location: 1672685-1673327 bp Feature: domain Description: Tra5 Location: 1 672685-1 673327 bp Feature: gene Location: 1673503-1673769 bp Ori: EHO13077.1 Feature: domain Description: HTH_Tnp_1 Location: 1673512-1673716 bp Feature: domain Description: HTH_Tnp_1 Location: 1 67351 2-1 67371 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TonB_C (pfam03544), RVT-UG5, PT_UbiA_2 (cd13963), DUF4133 (pfam13571), Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4141 (pfam13605), Bac_Flav_CT_M (TIGR03779)
Bac_Flav_CT_N (TIGR03780), RVT-UG12, Tra5 (COG2801), HTH_Tnp_1 (pfam01527)