myRT

myRT report for GCA_000242535.2_ASM24253v2

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Seq: AHJY01000026.1 Staphylococcus aureus subsp. aureus 21272 contig00006, whole genome shotgun sequence (135580 bp)
Overview 1 RT 1: 86240-92429 bp Neighborhood of RT #1 [86240, 92431] RVT-Retrons PRK08617 AlsD Feature: gene Location: 86240-86887 bp Feature: gene Location: 86851-87516 bp Feature: gene Location: 87760-88776 bp Ori: EHO96904.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 87910-88447 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8791 0-88447 bp Feature: gene Location: 90026-91690 bp Ori: EHO96820.1 Gene: alsS Feature: domain Description: PRK08617 Location: 90035-91682 bp Feature: domain Description: PRK0861 7 Location: 90035-91 682 bp Feature: gene Location: 91727-92431 bp Ori: EHO96868.1 Gene: budA_2 Feature: domain Description: AlsD Location: 91730-92429 bp Feature: domain Description: AlsD Location: 91 730-92429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK08617 (acetolactate synthase AlsS), AlsD (COG3527)

Seq: AHJY01000003.1 Staphylococcus aureus subsp. aureus 21272 contig00021, whole genome shotgun sequence (27269 bp)
Overview 1 RT 1: 2427-8977 bp Neighborhood of RT #1 [2427, 8977] MecR1 Transpeptidase PenP RVT-AbiK RVT-AbiK Feature: gene Location: 2427-4184 bp Ori: EHP00996.1 Gene: blaR Feature: domain Description: MecR1 Location: 2430-3459 bp Feature: domain Description: MecR1 Location: 2 430-3459 bp Feature: domain Description: Transpeptidase Location: 3513-4158 bp Feature: domain Description: Transpeptidase Location: 3513-4158 bp Feature: gene Location: 4291-5136 bp Ori: EHP01002.1 Feature: domain Description: PenP Location: 4303-5128 bp Feature: domain Description: PenP Location: 4303-512 8 bp Feature: gene Location: 5490-6581 bp Ori: EHP01007.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 5493-5673 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 5493-5673 bp Feature: gene Location: 6668-7258 bp Ori: EHP00995.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 7142-7241 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 7142 -72 41 bp Feature: gene Location: 7801-8409 bp Feature: gene Location: 8489-8977 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MecR1 (COG4219), Transpeptidase (pfam00905), PenP (COG2367), RVT-AbiK