myRT

myRT report for GCA_000242675.1_Euba_infi_F0142_V1

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Seq: JH594436.1 Eubacterium infirmum F0142 genomic scaffold supercont1.2, whole genome shotgun sequence (477763 bp)
Overview 1 RT 1: 124238-130159 bp 2 RT 2: 161483-167029 bp Neighborhood of RT #1 [124238, 130491] McrBC MutT_pyrophosphohydrolase RVT-GII GIIM FliA YvaK Neighborhood of RT #2 [161483, 167029] COG2865 COG2865 RVT-UG15 COG1373 Feature: gene Location: 124238-125554 bp Ori: EHO83301.1 Feature: domain Description: McrBC Location: 124439-125405 bp Feature: domain Description: McrBC Location: 1 24439-1 25405 bp Feature: gene Location: 125556-125957 bp Ori: EHO83302.1 Feature: domain Description: MutT_pyrophosphohydrolase Location: 125568-125940 bp Feature: domain Description: MutT_pyrophosphohydrolase Location: 1 25568-1 25940 bp Feature: gene Location: 126759-128051 bp Ori: EHO83303.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126960-127578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 26960-1 27578 bp Feature: domain Description: GIIM Note: maturase Location: 127632-127842 bp Feature: domain Description: GIIM Note: maturase Location: 1 27632-1 27842 bp Feature: gene Location: 128325-129590 bp Ori: EHO83304.1 Feature: domain Description: FliA Location: 129270-129579 bp Feature: domain Description: FliA Location: 1 29270-1 29579 bp Feature: gene Location: 129745-130491 bp Ori: EHO83305.1 Feature: domain Description: YvaK Location: 129778-130159 bp Feature: domain Description: YvaK Location: 1 29778-1 301 59 bp Feature: gene Location: 161483-161788 bp Ori: EHO83211.1 Feature: domain Description: COG2865 Location: 161486-161783 bp Feature: domain Description: COG2865 Location: 1 61 486-1 61 783 bp Feature: gene Location: 161992-162897 bp Ori: EHO83212.1 Feature: domain Description: COG2865 Location: 162007-162895 bp Feature: domain Description: COG2865 Location: 1 62007-1 62895 bp Feature: gene Location: 162931-164439 bp Ori: EHO83213.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 163363-163762 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 1 63363-1 63762 bp Feature: gene Location: 165099-166400 bp Ori: EHO83214.1 Feature: domain Description: COG1373 Location: 165105-166380 bp Feature: domain Description: COG1 373 Location: 1 651 05-1 66380 bp Feature: gene Location: 166718-167029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrBC (pfam10117), MutT_pyrophosphohydrolase (cd03425), RVT-GII, GIIM (pfam08388), FliA (COG1191), YvaK (COG1647), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-UG15, COG1373 (Predicted ATPase, AAA+ superfamily )