myRT

myRT report for GCA_000242995.2_Fusobacterium_sp_12_1B_V2

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Seq: KE161012.1 Fusobacterium sp. 12_1B genomic scaffold supercont2.6, whole genome shotgun sequence (95847 bp)
Overview 1 RT 1: 72935-78078 bp Neighborhood of RT #1 [72935, 78269] HTH_XRE PRK07726 RVT-GII KOG4768 PRK07726 Feature: gene Location: 72935-73621 bp Ori: EHO77171.1 Feature: domain Description: HTH_XRE Location: 72974-73136 bp Feature: domain Description: HTH_XRE Location: 72974-731 36 bp Feature: gene Location: 73680-74018 bp Ori: EHO77170.1 Feature: domain Description: PRK07726 Location: 73683-74007 bp Feature: domain Description: PRK07726 Location: 73683-74007 bp Feature: gene Location: 74558-75496 bp Ori: EHO77169.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74825-75488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74825-75488 bp Feature: gene Location: 75700-76401 bp Ori: EHO77168.1 Feature: domain Description: KOG4768 Location: 75712-76384 bp Feature: domain Description: KOG4768 Location: 7571 2-76384 bp Feature: gene Location: 76533-78269 bp Ori: EHO77167.1 Feature: domain Description: PRK07726 Location: 76536-78078 bp Feature: domain Description: PRK07726 Location: 76536-78078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), PRK07726 (DNA topoisomerase 3), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: KE161008.1 Fusobacterium sp. 12_1B genomic scaffold supercont2.2, whole genome shotgun sequence (659997 bp)
Overview 1 RT 1: 584773-589802 bp Neighborhood of RT #1 [584773, 589802] Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like RVT-CRISPR-like Feature: gene Location: 584773-584973 bp Feature: gene Location: 584954-586024 bp Ori: EHO80751.1 Feature: domain Description: Arm-DNA-bind_4 Location: 584987-585110 bp Feature: domain Description: Arm-DNA-bind_4 Location: 584987-585110 bp Feature: domain Description: Phage_int_SAM_3 Location: 585125-585293 bp Feature: domain Description: Phage_int_SAM_3 Location: 58512 5-5852 93 bp Feature: domain Description: INT_ICEBs1_C_like Location: 585473-585971 bp Feature: domain Description: INT_ICEBs1_C_like Location: 585473-585971 bp Feature: gene Location: 586975-588480 bp Ori: EPC09074.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 587260-587980 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 5872 60-587980 bp Feature: gene Location: 588541-589050 bp Feature: gene Location: 589704-589802 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), RVT-CRISPR

Seq: KE161007.1 Fusobacterium sp. 12_1B genomic scaffold supercont2.1, whole genome shotgun sequence (1856764 bp)
Overview 1 RT 1: 606258-611219 bp Neighborhood of RT #1 [606258, 611284] TrmA RVT-UG12 Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like HTH_17 Feature: gene Location: 606258-606518 bp Feature: gene Location: 606537-607892 bp Ori: EHO83705.1 Feature: domain Description: TrmA Location: 606555-607869 bp Feature: domain Description: TrmA Location: 606555-607869 bp Feature: gene Location: 608040-609623 bp Ori: EHO83704.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 608415-608853 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 608415-608853 bp Feature: gene Location: 609765-611009 bp Ori: EHO83703.1 Feature: domain Description: Arm-DNA-bind_4 Location: 609798-609924 bp Feature: domain Description: Arm-DNA-bind_4 Location: 609798-609924 bp Feature: domain Description: Phage_int_SAM_3 Location: 609957-610125 bp Feature: domain Description: Phage_int_SAM_3 Location: 609957-610125 bp Feature: domain Description: INT_ICEBs1_C_like Location: 610302-610938 bp Feature: domain Description: INT_ICEBs1_C_like Location: 6103 02-61093 8 bp Feature: gene Location: 611009-611284 bp Ori: EHO83702.1 Feature: domain Description: HTH_17 Location: 611078-611219 bp Feature: domain Description: HTH_17 Location: 611078-611219 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrmA (COG2265), RVT-UG12, Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), HTH_17 (pfam12728)