myRT

myRT report for GCA_000243095.2_ASM24309v2

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Seq: AHJE01000050.1 Cupriavidus basilensis OR16 contig050, whole genome shotgun sequence (99387 bp)
Overview 1 RT 1: 92505-98634 bp Neighborhood of RT #1 [92505, 98634] ldcA PRK15064 RVT-UG2 DUF1883 Feature: gene Location: 92505-93473 bp Ori: EHP41352.1 Gene: ldcA Feature: domain Description: ldcA Location: 92535-93450 bp Feature: domain Description: ldcA Location: 92535-93450 bp Feature: gene Location: 93714-95324 bp Ori: EHP41353.1 Feature: domain Description: PRK15064 Location: 93717-95316 bp Feature: domain Description: PRK1 5064 Location: 9371 7-9531 6 bp Feature: gene Location: 96023-97312 bp Ori: EHP41354.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 96230-97013 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 96230-9701 3 bp Feature: gene Location: 97669-97935 bp Ori: EHP41355.1 Feature: domain Description: DUF1883 Location: 97672-97927 bp Feature: domain Description: DUF1 883 Location: 97672-97927 bp Feature: gene Location: 98353-98634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ldcA (PRK11253), PRK15064 (ABC transporter ATP-binding protein; Provisional), RVT-UG2, DUF1883 (pfam08980)

Seq: AHJE01000051.1 Cupriavidus basilensis OR16 contig051, whole genome shotgun sequence (54560 bp)
Overview 1 RT 1: 35574-43115 bp Neighborhood of RT #1 [35574, 43138] AlpA PHA02517 RVT-Retrons Glyco_hydro_114 Feature: gene Location: 35574-35834 bp Ori: EHP41250.1 Feature: domain Description: AlpA Location: 35649-35829 bp Feature: domain Description: AlpA Location: 35649-3582 9 bp Feature: gene Location: 37292-37855 bp Ori: EHP41251.1 Feature: domain Description: PHA02517 Location: 37298-37823 bp Feature: domain Description: PHA02 517 Location: 372 98-3782 3 bp Feature: gene Location: 39692-40612 bp Ori: EHP41252.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39794-40376 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39794-40376 bp Feature: gene Location: 40774-41286 bp Feature: gene Location: 42281-43138 bp Ori: EHP41254.1 Feature: domain Description: Glyco_hydro_114 Location: 42446-43115 bp Feature: domain Description: Glyco_hydro_114 Location: 42 446-43115 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlpA (COG3311), PHA02517 (putative transposase OrfB; Reviewed), RVT-Retrons, Glyco_hydro_114 (pfam03537)