myRT

myRT report for GCA_000243415.3_ASM24341v3

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Seq: KI912270.1 Mycobacterium tusciae JS617 genomic scaffold MyctuDRAFT_MTC.4, whole genome shotgun sequence (6945570 bp)
Overview 1 RT 1: 4922891-4928660 bp 2 RT 2: 4982755-4986174 bp Neighborhood of RT #1 [4922891, 4928767] PcbC DDE_3 RVT-GII GIIM COG4584 IstB_IS21 Neighborhood of RT #2 [4982755, 4986203] ComA ExeA RVT-GII GIIM PHA02517 Phage_int_SAM_1 INT_RitA_C_like Feature: gene Location: 4922891-4923748 bp Feature: domain Description: PcbC Location: 4922897-4923698 bp Feature: domain Description: PcbC Location: 4922897-4923698 bp Feature: gene Location: 4923970-4924251 bp Feature: domain Description: DDE_3 Location: 4923976-4924249 bp Feature: domain Description: DDE_3 Location: 4923976-4924249 bp Feature: gene Location: 4924894-4926210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4925209-4925896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4925209-4925896 bp Feature: domain Description: GIIM Note: maturase Location: 4925971-4926178 bp Feature: domain Description: GIIM Note: maturase Location: 4925971 -49261 78 bp Feature: gene Location: 4926259-4927944 bp Feature: domain Description: COG4584 Location: 4926847-4927285 bp Feature: domain Description: COG4584 Location: 4926847-4927285 bp Feature: gene Location: 4927946-4928767 bp Feature: domain Description: IstB_IS21 Location: 4928138-4928660 bp Feature: domain Description: IstB_IS21 Location: 49281 38-4928660 bp Feature: gene Location: 4982755-4983195 bp Feature: domain Description: ComA Location: 4982764-4983160 bp Feature: domain Description: ComA Location: 4982764-49831 60 bp Feature: gene Location: 4983303-4983653 bp Feature: domain Description: ExeA Location: 4983321-4983618 bp Feature: domain Description: ExeA Location: 4983321 -498361 8 bp Feature: gene Location: 4983864-4984565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4983873-4984134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4983873-49841 34 bp Feature: domain Description: GIIM Note: maturase Location: 4984212-4984440 bp Feature: domain Description: GIIM Note: maturase Location: 498421 2-4984440 bp Feature: gene Location: 4984593-4984946 bp Feature: domain Description: PHA02517 Location: 4984674-4984869 bp Feature: domain Description: PHA0251 7 Location: 4984674-4984869 bp Feature: gene Location: 4985004-4986203 bp Feature: domain Description: Phage_int_SAM_1 Location: 4985367-4985571 bp Feature: domain Description: Phage_int_SAM_1 Location: 4985367-4985571 bp Feature: domain Description: INT_RitA_C_like Location: 4985661-4986174 bp Feature: domain Description: INT_RitA_C_like Location: 4985661 -49861 74 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PcbC (COG3491), DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388), COG4584 (Transposase ), IstB_IS21 (pfam01695), ComA (pfam02679), ExeA (COG3267), PHA02517 (putative transposase OrfB; Reviewed), Phage_int_SAM_1 (pfam02899)
INT_RitA_C_like (cd01188)