myRT

myRT report for GCA_000243535.3_gls454021v02

Download annotations/find similar RTs

Seq: AHMF02000041.1 Leptospira noguchii str. 1993005606 ctg7180000020907, whole genome shotgun sequence (23050 bp)
Overview 1 RT 1: 11222-15883 bp Neighborhood of RT #1 [11222, 15883] Sco1 RVT-GII KOG4768 DMT_6 Feature: gene Location: 11222-11818 bp Feature: domain Description: Sco1 Location: 11246-11813 bp Feature: domain Description: Sco1 Location: 1 1 246-1 1 81 3 bp Feature: gene Location: 12117-12959 bp Feature: gene Location: 13559-14857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13868-14492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3868-1 4492 bp Feature: domain Description: KOG4768 Location: 14600-14732 bp Feature: domain Description: KOG4768 Location: 1 4600-1 4732 bp Feature: gene Location: 15400-15708 bp Feature: domain Description: DMT_6 Location: 15403-15688 bp Feature: domain Description: DMT_6 Location: 1 5403-1 5688 bp Feature: gene Location: 15764-15883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sco1 (COG1999), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), DMT_6 (pfam04342)

Seq: AHMF02000026.1 Leptospira noguchii str. 1993005606 ctg7180000020807, whole genome shotgun sequence (25294 bp)
Overview 1 RT 1: 75-2851 bp Neighborhood of RT #1 [75, 2851] RVT-GII KOG4768 Feature: gene Location: 75-899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99-534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99-534 bp Feature: domain Description: KOG4768 Location: 639-774 bp Feature: domain Description: KOG4768 Location: 639-774 bp Feature: gene Location: 1965-2081 bp Feature: gene Location: 2375-2851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: AHMF02000107.1 Leptospira noguchii str. 1993005606 ctg7180000020914, whole genome shotgun sequence (4459 bp)
Overview 1 RT 1: 1-3667 bp Neighborhood of RT #1 [1, 3906] RVT-GII GIIM HisKA_7TM Feature: gene Location: 1-190 bp Feature: gene Location: 255-1652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 609-1266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 609-1266 bp Feature: domain Description: GIIM Note: maturase Location: 1350-1578 bp Feature: domain Description: GIIM Note: maturase Location: 13 50-1578 bp Feature: gene Location: 2319-2966 bp Feature: gene Location: 2974-3906 bp Feature: domain Description: HisKA_7TM Location: 3019-3667 bp Feature: domain Description: HisKA_7TM Location: 3 019-3 667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HisKA_7TM (pfam16927)

Seq: AHMF02000123.1 Leptospira noguchii str. 1993005606 ctg7180000020831, whole genome shotgun sequence (62912 bp)
Overview 1 RT 1: 58556-62437 bp Neighborhood of RT #1 [58556, 62437] DDE_Tnp_1_6 RVT-GII KOG4768 Transposase_31 T_den_put_tspse Feature: gene Location: 58556-58759 bp Feature: domain Description: DDE_Tnp_1_6 Location: 58562-58700 bp Feature: domain Description: DDE_Tnp_1_6 Location: 58562-58700 bp Feature: gene Location: 58740-58946 bp Feature: gene Location: 59096-60172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59183-59807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59183-59807 bp Feature: domain Description: KOG4768 Location: 59915-60047 bp Feature: domain Description: KOG4 768 Location: 59915-6004 7 bp Feature: gene Location: 61094-62068 bp Feature: domain Description: Transposase_31 Location: 61112-61721 bp Feature: domain Description: Transposase_31 Location: 61112-61721 bp Feature: domain Description: T_den_put_tspse Location: 61910-62057 bp Feature: domain Description: T_den_put_tspse Location: 61910-62057 bp Feature: gene Location: 62234-62437 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_6 (pfam13751), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), Transposase_31 (pfam04754), T_den_put_tspse (TIGR01784)

Seq: AHMF02000092.1 Leptospira noguchii str. 1993005606 ctg7180000020828, whole genome shotgun sequence (191770 bp)
Overview 1 RT 1: 186713-191171 bp Neighborhood of RT #1 [186713, 191296] MA MCPsignal RVT-GII KOG4768 Feature: gene Location: 186713-188308 bp Feature: domain Description: MA Location: 187355-187571 bp Feature: domain Description: MA Location: 18735 5 -1875 71 bp Feature: domain Description: MCPsignal Location: 187709-188147 bp Feature: domain Description: MCPsignal Location: 187709-188147 bp Feature: gene Location: 188638-188922 bp Feature: gene Location: 189998-191296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190307-190931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190307-190931 bp Feature: domain Description: KOG4768 Location: 191039-191171 bp Feature: domain Description: KOG4768 Location: 191039-191171 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MA (smart00283), MCPsignal (pfam00015), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: AHMF02000137.1 Leptospira noguchii str. 1993005606 ctg7180000020889, whole genome shotgun sequence (21035 bp)
Overview 1 RT 1: 1-4466 bp Neighborhood of RT #1 [1, 4480] RVT-GII KOG4768 RpoE Feature: gene Location: 1-181 bp Feature: gene Location: 1302-2600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1611-2235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16 11-2235 bp Feature: domain Description: KOG4768 Location: 2343-2475 bp Feature: domain Description: KOG476 8 Location: 2343-2475 bp Feature: gene Location: 3073-3195 bp Feature: gene Location: 3980-4480 bp Feature: domain Description: RpoE Location: 3986-4466 bp Feature: domain Description: RpoE Location: 3986 -446 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RpoE (COG3343)