myRT

myRT report for GCA_000243575.3_gls454035v02

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Seq: AHMH02000110.1 Leptospira noguchii str. 2007001578 ctg7180000016218, whole genome shotgun sequence (10165 bp)
Overview 1 RT 1: 188-2918 bp Neighborhood of RT #1 [188, 2932] RVT-GII KOG4768 flgF Feature: gene Location: 188-1486 bp Ori: EMM99727.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 497-1121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 497-1 1 21 bp Feature: domain Description: KOG4768 Location: 1229-1361 bp Feature: domain Description: KOG4768 Location: 1 229-1 361 bp Feature: gene Location: 2150-2272 bp Feature: gene Location: 2315-2932 bp Ori: EMM99728.1 Feature: domain Description: flgF Location: 2450-2918 bp Feature: domain Description: flgF Location: 2450-291 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), flgF (TIGR02490)

Seq: AHMH02000148.1 Leptospira noguchii str. 2007001578 ctg7180000016219, whole genome shotgun sequence (13387 bp)
Overview 1 RT 1: 6880-11453 bp Neighborhood of RT #1 [6880, 11453] RVT-CRISPR-like Feature: gene Location: 6880-7044 bp Feature: gene Location: 7786-8367 bp Feature: gene Location: 8407-9804 bp Ori: EMM98556.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 8821-9436 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 882 1-9436 bp Feature: gene Location: 10524-10952 bp Feature: gene Location: 10977-11453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: AHMH02000007.1 Leptospira noguchii str. 2007001578 ctg7180000016224, whole genome shotgun sequence (6491 bp)
Overview 1 RT 1: 2919-6134 bp Neighborhood of RT #1 [2919, 6259] Transposase_31 T_den_put_tspse RVT-GII KOG4768 Feature: gene Location: 2919-3122 bp Feature: gene Location: 3288-4262 bp Ori: EMN02680.1 Feature: domain Description: Transposase_31 Location: 3306-3915 bp Feature: domain Description: Transposase_3 1 Location: 3 3 06-3 915 bp Feature: domain Description: T_den_put_tspse Location: 4104-4251 bp Feature: domain Description: T_den_put_tspse Location: 4104-4251 bp Feature: gene Location: 4961-6259 bp Ori: EMN02677.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5270-5894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5270-5894 bp Feature: domain Description: KOG4768 Location: 6002-6134 bp Feature: domain Description: KOG4768 Location: 6002-613 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_31 (pfam04754), T_den_put_tspse (TIGR01784), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: AHMH02000008.1 Leptospira noguchii str. 2007001578 ctg7180000016333, whole genome shotgun sequence (59496 bp)
Overview 1 RT 1: 49970-54174 bp Neighborhood of RT #1 [49970, 54174] EmrE NHL_like_1 RVT-GII GIIM Feature: gene Location: 49970-50347 bp Ori: EMN02638.1 Feature: domain Description: EmrE Location: 49991-50315 bp Feature: domain Description: EmrE Location: 4 9991-50315 bp Feature: gene Location: 50432-51229 bp Ori: EMN02656.1 Feature: domain Description: NHL_like_1 Location: 50435-51128 bp Feature: domain Description: NHL_like_1 Location: 504 35-51128 bp Feature: gene Location: 51709-53106 bp Ori: EMN02632.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52063-52720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52063-52720 bp Feature: domain Description: GIIM Note: maturase Location: 52804-53032 bp Feature: domain Description: GIIM Note: maturase Location: 52804 -53032 bp Feature: gene Location: 53715-53996 bp Feature: gene Location: 54034-54174 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EmrE (pfam13536), NHL_like_1 (cd14953), RVT-GII, GIIM (pfam08388)

Seq: AHMH02000027.1 Leptospira noguchii str. 2007001578 ctg7180000016312, whole genome shotgun sequence (63461 bp)
Overview 1 RT 1: 522-3915 bp Neighborhood of RT #1 [522, 4007] RVT-GII RVT-GII GIIM DDE_Tnp_1_6 DUF932 Feature: gene Location: 522-668 bp Feature: gene Location: 889-1098 bp Feature: gene Location: 1660-2418 bp Ori: EMN02101.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1969-2404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1969-2404 bp Feature: gene Location: 2394-2957 bp Ori: EMN02095.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2409-2592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2409-25 92 bp Feature: domain Description: GIIM Note: maturase Location: 2664-2868 bp Feature: domain Description: GIIM Note: maturase Location: 2664-2868 bp Feature: gene Location: 3165-3392 bp Ori: EMN02117.1 Feature: domain Description: DDE_Tnp_1_6 Location: 3174-3333 bp Feature: domain Description: DDE_Tnp_1_6 Location: 3174-3333 bp Feature: gene Location: 3384-4007 bp Ori: EMN02113.1 Feature: domain Description: DUF932 Location: 3450-3915 bp Feature: domain Description: DUF932 Location: 345 0-3915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1_6 (pfam13751), DUF932 (pfam06067)