myRT

myRT report for GCA_000243955.3_LintL0448v0.2

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Seq: AHNA02000071.1 Leptospira interrogans serovar Medanensis str. L0448 ctg7180000005341, whole genome shotgun sequence (279978 bp)
Overview 1 RT 1: 1266-6189 bp Neighborhood of RT #1 [1266, 6197] DEDD_Tnp_IS110 RVT-GII RVT-GII GIIM PHA02517 Feature: gene Location: 1266-1937 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 1287-1725 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 1 287-1 725 bp Feature: gene Location: 2793-2936 bp Feature: gene Location: 2933-3571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3146-3548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 46-3548 bp Feature: gene Location: 3555-4190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3558-3804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3558-3804 bp Feature: domain Description: GIIM Note: maturase Location: 3888-4116 bp Feature: domain Description: GIIM Note: maturase Location: 3888-41 1 6 bp Feature: gene Location: 5207-5329 bp Feature: gene Location: 5352-6197 bp Feature: domain Description: PHA02517 Location: 5412-6189 bp Feature: domain Description: PHA0251 7 Location: 541 2-61 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEDD_Tnp_IS110 (pfam01548), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: AHNA02000008.1 Leptospira interrogans serovar Medanensis str. L0448 ctg7180000005331, whole genome shotgun sequence (104993 bp)
Overview 1 RT 1: 41599-47070 bp Neighborhood of RT #1 [41599, 47444] YvaK PRK10030 RVT-GII KOG4768 RpoE FecR Feature: gene Location: 41599-42246 bp Feature: domain Description: YvaK Location: 41761-41896 bp Feature: domain Description: YvaK Location: 41761-41896 bp Feature: gene Location: 42366-42989 bp Feature: domain Description: PRK10030 Location: 42384-42981 bp Feature: domain Description: PRK10030 Location: 42 384-42 981 bp Feature: gene Location: 43777-45075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44086-44710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44086-44710 bp Feature: domain Description: KOG4768 Location: 44815-44950 bp Feature: domain Description: KOG4768 Location: 44815-44950 bp Feature: gene Location: 45832-46332 bp Feature: domain Description: RpoE Location: 45838-46318 bp Feature: domain Description: RpoE Location: 45838-46318 bp Feature: gene Location: 46353-47444 bp Feature: domain Description: FecR Location: 46779-47070 bp Feature: domain Description: FecR Location: 46779-47070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YvaK (COG1647), PRK10030 (YiiX family permuted papain-like enzyme), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RpoE (COG3343), FecR (pfam04773)