myRT

myRT report for GCA_000244115.3_gls454096v2.0

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Seq: AHNI02000009.1 Leptospira interrogans serovar Hebdomadis str. R499 ctg7180000004712, whole genome shotgun sequence (138747 bp)
Overview 1 RT 1: 368-3918 bp Neighborhood of RT #1 [368, 4292] RVT-GII KOG4768 RpoE FecR Feature: gene Location: 368-1666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 677-1301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 677-1 301 bp Feature: domain Description: KOG4768 Location: 1406-1541 bp Feature: domain Description: KOG4768 Location: 1 406-1 541 bp Feature: gene Location: 2680-3180 bp Feature: domain Description: RpoE Location: 2686-3166 bp Feature: domain Description: RpoE Location: 2686-31 66 bp Feature: gene Location: 3201-4292 bp Feature: domain Description: FecR Location: 3627-3918 bp Feature: domain Description: FecR Location: 3627-391 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RpoE (COG3343), FecR (pfam04773), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: AHNI02000061.1 Leptospira interrogans serovar Hebdomadis str. R499 ctg7180000004677, whole genome shotgun sequence (3636 bp)
Overview 1 RT 1: 1-3304 bp Neighborhood of RT #1 [1, 3543] PHA02517 RVT-GII DEDD_Tnp_IS110 Feature: gene Location: 1-132 bp Feature: gene Location: 157-1002 bp Feature: domain Description: PHA02517 Location: 217-994 bp Feature: domain Description: PHA02 517 Location: 2 17-994 bp Feature: gene Location: 1211-1849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1424-1826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142 4-182 6 bp Feature: gene Location: 1846-1989 bp Feature: gene Location: 2845-3543 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 2866-3304 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 2 866-3304 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), DEDD_Tnp_IS110 (pfam01548)