myRT

myRT report for GCA_000244275.3_gls454104v2.0

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Seq: AHNQ02000020.1 Leptospira interrogans str. UI 12621 ctg7180000004635, whole genome shotgun sequence (14881 bp)
Overview 1 RT 1: 9026-13659 bp Neighborhood of RT #1 [9026, 13659] rve_3 RVT-GII KOG4768 Feature: gene Location: 9026-9877 bp Feature: gene Location: 9926-10309 bp Ori: EKO25866.1 Feature: domain Description: rve_3 Location: 9935-10025 bp Feature: domain Description: rve_3 Location: 9935-1 0025 bp Feature: gene Location: 10515-11813 bp Ori: EKO25870.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10824-11448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0824-1 1 448 bp Feature: domain Description: KOG4768 Location: 11553-11688 bp Feature: domain Description: KOG4768 Location: 1 1 553-1 1 688 bp Feature: gene Location: 12861-12998 bp Feature: gene Location: 13501-13659 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve_3 (pfam13683), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: AHNQ02000034.1 Leptospira interrogans str. UI 12621 ctg7180000004645, whole genome shotgun sequence (708416 bp)
Overview 1 RT 1: 25729-32069 bp 2 RT 2: 463564-469087 bp Neighborhood of RT #1 [25729, 32069] RVT-UG28b Neighborhood of RT #2 [463564, 469101] RVT-GII KOG4768 GT2_SpsF PRK06209 Feature: gene Location: 25729-26766 bp Feature: gene Location: 27513-28571 bp Feature: gene Location: 28604-30421 bp Ori: EKO24297.1 Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 29039-29753 bp Feature: RT Description: RVT-UG2 8b Note: UG2 8b RT Location: 2 9039-2 9753 bp Feature: gene Location: 30438-30731 bp Feature: gene Location: 31101-32069 bp Feature: gene Location: 463564-463848 bp Feature: gene Location: 464017-464130 bp Feature: gene Location: 464848-466146 bp Ori: EKO24244.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465157-465781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465157-465781 bp Feature: domain Description: KOG4768 Location: 465886-466021 bp Feature: domain Description: KOG4768 Location: 465886-46602 1 bp Feature: gene Location: 466816-467043 bp Feature: gene Location: 467089-469101 bp Ori: EKO24309.1 Feature: domain Description: GT2_SpsF Location: 467101-467788 bp Feature: domain Description: GT2 _SpsF Location: 467101-467788 bp Feature: domain Description: PRK06209 Location: 467836-469087 bp Feature: domain Description: PRK062 09 Location: 467836-469087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28b, RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), GT2_SpsF (cd02518), PRK06209 (glutamate-1-semialdehyde 2,1-aminomutase; Provisional)

Seq: AHNQ02000027.1 Leptospira interrogans str. UI 12621 ctg7180000004632, whole genome shotgun sequence (353369 bp)
Overview 1 RT 1: 77340-82585 bp Neighborhood of RT #1 [77340, 82959] YvaK RVT-GII KOG4768 RpoE FecR Feature: gene Location: 77340-77987 bp Ori: EKO25072.1 Feature: domain Description: YvaK Location: 77502-77637 bp Feature: domain Description: YvaK Location: 77502-7763 7 bp Feature: gene Location: 77984-78190 bp Feature: gene Location: 79014-80312 bp Ori: EKO25054.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79323-79947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 793 23 -79947 bp Feature: domain Description: KOG4768 Location: 80052-80187 bp Feature: domain Description: KOG4768 Location: 80052-80187 bp Feature: gene Location: 81347-81847 bp Ori: EKO24842.1 Feature: domain Description: RpoE Location: 81353-81833 bp Feature: domain Description: RpoE Location: 813 53 -8183 3 bp Feature: gene Location: 81868-82959 bp Ori: EKO24881.1 Feature: domain Description: FecR Location: 82294-82585 bp Feature: domain Description: FecR Location: 82294-82585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YvaK (COG1647), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RpoE (COG3343), FecR (pfam04773)