myRT

myRT report for GCA_000244315.3_LintUI12764v0.2

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Seq: AHNS02000010.1 Leptospira interrogans serovar Grippotyphosa str. UI 12764 ctg7180000005575, whole genome shotgun sequence (12893 bp)
Overview 1 RT 1: 203-3943 bp Neighborhood of RT #1 [203, 4185] GIIM RVT-GII RVT-GII HNHc Feature: gene Location: 203-337 bp Feature: gene Location: 360-530 bp Ori: EMN82446.1 Feature: domain Description: GIIM Note: maturase Location: 396-498 bp Feature: domain Description: GIIM Note: maturase Location: 396-498 bp Feature: gene Location: 505-885 bp Ori: EMN82460.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 514-823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 4-823 bp Feature: gene Location: 867-1499 bp Ori: EMN82454.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1176-1494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 76-1 494 bp Feature: gene Location: 2345-3442 bp Feature: gene Location: 3568-4185 bp Ori: EMN82455.1 Feature: domain Description: HNHc Note: nucleases Location: 3787-3943 bp Feature: domain Description: HNHc Note: nucleases Location: 3787-3943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, HNHc (smart00507)

Seq: AHNS02000015.1 Leptospira interrogans serovar Grippotyphosa str. UI 12764 ctg7180000005620, whole genome shotgun sequence (16901 bp)
Overview 1 RT 1: 203-3236 bp Neighborhood of RT #1 [203, 3247] RVT-GII KOG4768 MazE PemK_toxin Feature: gene Location: 203-1501 bp Ori: EMN82205.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 512-1136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 512 -1136 bp Feature: domain Description: KOG4768 Location: 1241-1376 bp Feature: domain Description: KOG4768 Location: 12 41-1376 bp Feature: gene Location: 2682-2930 bp Ori: EMN82211.1 Feature: domain Description: MazE Location: 2685-2868 bp Feature: domain Description: MazE Location: 2 685-2 868 bp Feature: gene Location: 3131-3247 bp Ori: EMN82215.1 Feature: domain Description: PemK_toxin Location: 3137-3236 bp Feature: domain Description: PemK_toxin Location: 3137-32 36 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), MazE (COG2336), PemK_toxin (pfam02452)

Seq: AHNS02000049.1 Leptospira interrogans serovar Grippotyphosa str. UI 12764 ctg7180000005599, whole genome shotgun sequence (27714 bp)
Overview 1 RT 1: 395-9775 bp Neighborhood of RT #1 [395, 9775] DUF932 RVT-UG28b Feature: gene Location: 395-1174 bp Ori: EMN80305.1 Feature: domain Description: DUF932 Location: 461-1103 bp Feature: domain Description: DUF93 2 Location: 461-1103 bp Feature: gene Location: 1178-2779 bp Feature: gene Location: 3342-5276 bp Ori: EMN80301.1 Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 3777-4491 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 3 777-4491 bp Feature: gene Location: 7138-8175 bp Feature: gene Location: 8723-9775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-UG28b

Seq: AHNS02000025.1 Leptospira interrogans serovar Grippotyphosa str. UI 12764 ctg7180000005598, whole genome shotgun sequence (316635 bp)
Overview 1 RT 1: 311607-316604 bp Neighborhood of RT #1 [311607, 316604] GT2_SpsF PRK06209 RVT-GII KOG4768 Feature: gene Location: 311607-313619 bp Ori: EMN81581.1 Feature: domain Description: GT2_SpsF Location: 311619-312306 bp Feature: domain Description: GT2_SpsF Location: 311619-312306 bp Feature: domain Description: PRK06209 Location: 312354-313605 bp Feature: domain Description: PRK06209 Location: 312354 -313605 bp Feature: gene Location: 313665-313892 bp Feature: gene Location: 314563-315861 bp Ori: EMN81445.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 314872-315496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 314 872-3154 96 bp Feature: domain Description: KOG4768 Location: 315601-315736 bp Feature: domain Description: KOG4 768 Location: 315601-315736 bp Feature: gene Location: 316068-316253 bp Feature: gene Location: 316422-316604 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT2_SpsF (cd02518), PRK06209 (glutamate-1-semialdehyde 2,1-aminomutase; Provisional), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: AHNS02000008.1 Leptospira interrogans serovar Grippotyphosa str. UI 12764 ctg7180000005577, whole genome shotgun sequence (7960 bp)
Overview 1 RT 1: 3508-7960 bp Neighborhood of RT #1 [3508, 7960] HisKA_7TM RVT-GII KOG4768 Feature: gene Location: 3508-4398 bp Ori: EMN82490.1 Feature: domain Description: HisKA_7TM Location: 3520-4156 bp Feature: domain Description: HisKA_7TM Location: 35 20-415 6 bp Feature: gene Location: 5133-5609 bp Feature: gene Location: 5862-7160 bp Ori: EMN82492.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6171-6795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6171-6795 bp Feature: domain Description: KOG4768 Location: 6900-7035 bp Feature: domain Description: KOG4768 Location: 6900-7035 bp Feature: gene Location: 7848-7960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HisKA_7TM (pfam16927), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )