myRT

myRT report for GCA_000244555.3_gls454163v02

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Seq: AHOE02000058.1 Leptospira santarosai str. CBC379 ctg7180000005357, whole genome shotgun sequence (2722 bp)
Overview 1 RT 1: 1-1969 bp Neighborhood of RT #1 [1, 2100] HTH_23 RVT-GII KOG4768 Feature: gene Location: 1-134 bp Ori: EKR89760.1 Feature: domain Description: HTH_23 Location: 46-130 bp Feature: domain Description: HTH_23 Location: 46-1 30 bp Feature: gene Location: 949-2100 bp Ori: EKR89761.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1105-1729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 05-1 729 bp Feature: domain Description: KOG4768 Location: 1834-1969 bp Feature: domain Description: KOG4768 Location: 1 834-1 969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: AHOE02000040.1 Leptospira santarosai str. CBC379 ctg7180000005371, whole genome shotgun sequence (105640 bp)
Overview 1 RT 1: 89-2600 bp Neighborhood of RT #1 [89, 2701] RVT-GII GIIM DDE_Tnp_1 DUF4096 Feature: gene Location: 89-1249 bp Ori: EKR90642.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 398-1022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 398-102 2 bp Feature: domain Description: GIIM Note: maturase Location: 1094-1241 bp Feature: domain Description: GIIM Note: maturase Location: 1094-12 41 bp Feature: gene Location: 1905-2324 bp Ori: EKR90677.1 Feature: domain Description: DDE_Tnp_1 Location: 1911-2265 bp Feature: domain Description: DDE_Tnp_1 Location: 1911-2 2 65 bp Feature: gene Location: 2354-2701 bp Ori: EKR90633.1 Feature: domain Description: DUF4096 Location: 2381-2600 bp Feature: domain Description: DUF4096 Location: 2 381-2 600 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609), DUF4096 (pfam13340)

Seq: AHOE02000037.1 Leptospira santarosai str. CBC379 ctg7180000005422, whole genome shotgun sequence (5852 bp)
Overview 1 RT 1: 28-5528 bp Neighborhood of RT #1 [28, 5528] COG3415 DDE_3 RVT-UG28b Feature: gene Location: 28-513 bp Ori: EKR90704.1 Feature: domain Description: COG3415 Location: 61-484 bp Feature: domain Description: COG3 415 Location: 61-484 bp Feature: gene Location: 566-1030 bp Ori: EKR90707.1 Feature: domain Description: DDE_3 Location: 575-923 bp Feature: domain Description: DDE_3 Location: 575-923 bp Feature: gene Location: 1131-2891 bp Ori: EKR90706.1 Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 1569-2280 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 1569-2280 bp Feature: gene Location: 2990-4057 bp Feature: gene Location: 4722-5528 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3415 (Transposase ), DDE_3 (pfam13358), RVT-UG28b

Seq: AHOE02000008.1 Leptospira santarosai str. CBC379 ctg7180000005370, whole genome shotgun sequence (436345 bp)
Overview 1 RT 1: 112911-118630 bp Neighborhood of RT #1 [112911, 118854] RVT-GII KOG4768 AmyAc_OligoGlu_like Feature: gene Location: 112911-113354 bp Feature: gene Location: 114023-114484 bp Feature: gene Location: 114779-116083 bp Ori: EKR93029.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115088-115712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115088-115712 bp Feature: domain Description: KOG4768 Location: 115817-115952 bp Feature: domain Description: KOG4 768 Location: 115817-115952 bp Feature: gene Location: 116906-117160 bp Feature: gene Location: 117181-118854 bp Ori: EKR93134.1 Feature: domain Description: AmyAc_OligoGlu_like Location: 117235-118630 bp Feature: domain Description: AmyAc_OligoGlu_like Location: 117235-118630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), AmyAc_OligoGlu_like (cd11331)

Seq: AHOE02000046.1 Leptospira santarosai str. CBC379 ctg7180000005368, whole genome shotgun sequence (103326 bp)
Overview 1 RT 1: 18907-24792 bp Neighborhood of RT #1 [18907, 25211] RVT-GII KOG4768 S1-P1_nuclease ACAD Feature: gene Location: 18907-19392 bp Feature: gene Location: 19691-19855 bp Feature: gene Location: 20550-21854 bp Ori: EKR90337.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20859-21483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2085 9-21483 bp Feature: domain Description: KOG4768 Location: 21588-21723 bp Feature: domain Description: KOG4768 Location: 215 88-21723 bp Feature: gene Location: 22271-23149 bp Ori: EKR90348.1 Feature: domain Description: S1-P1_nuclease Location: 22349-23135 bp Feature: domain Description: S1-P1_nuclease Location: 22349-23135 bp Feature: gene Location: 24147-25211 bp Ori: EKR90393.1 Feature: domain Description: ACAD Location: 24441-24792 bp Feature: domain Description: ACAD Location: 24441-24792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), S1-P1_nuclease (pfam02265), ACAD (cl09933)