myRT

myRT report for GCA_000244655.3_gls454171v2.0

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Seq: AHOJ02000006.1 Leptospira santarosai str. HAI1380 ctg7180000004189, whole genome shotgun sequence (137948 bp)
Overview 1 RT 1: 19625-26476 bp Neighborhood of RT #1 [19625, 26487] Alginate_exp RVT-GII GIIM OmdA UhpC Feature: gene Location: 19625-21427 bp Ori: EMP04244.1 Feature: domain Description: Alginate_exp Location: 19862-21335 bp Feature: domain Description: Alginate_exp Location: 1 9862-21 335 bp Feature: gene Location: 21944-22060 bp Feature: gene Location: 22559-23905 bp Ori: EMP04232.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22892-23552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22892-23552 bp Feature: domain Description: GIIM Note: maturase Location: 23633-23825 bp Feature: domain Description: GIIM Note: maturase Location: 23633-23825 bp Feature: gene Location: 24384-25046 bp Ori: EMP04208.1 Feature: domain Description: OmdA Location: 24846-25011 bp Feature: domain Description: OmdA Location: 24846-2501 1 bp Feature: gene Location: 25156-26487 bp Ori: EMP04254.1 Feature: domain Description: UhpC Location: 25186-26476 bp Feature: domain Description: UhpC Location: 251 86-26476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Alginate_exp (pfam13372), RVT-GII, GIIM (pfam08388), OmdA (pfam13376), UhpC (COG2271)

Seq: AHOJ02000003.1 Leptospira santarosai str. HAI1380 ctg7180000004193, whole genome shotgun sequence (56320 bp)
Overview 1 RT 1: 35761-40687 bp Neighborhood of RT #1 [35761, 40764] RVT-UG20 DUF3800 Feature: gene Location: 35761-36078 bp Feature: gene Location: 36044-36703 bp Feature: gene Location: 37482-38810 bp Ori: EMP04380.1 Feature: RT Description: RVT-UG20 Note: UG20 RT Location: 37536-38028 bp Feature: RT Description: RVT-UG2 0 Note: UG2 0 RT Location: 37536-3802 8 bp Feature: gene Location: 38870-39070 bp Feature: gene Location: 39724-40764 bp Ori: EMP04374.1 Feature: domain Description: DUF3800 Location: 40147-40687 bp Feature: domain Description: DUF3800 Location: 40147-40687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG20, DUF3800 (pfam12686)