myRT

myRT report for GCA_000244675.3_gls454175v2.0

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Seq: AHOK02000049.1 Leptospira santarosai str. HAI821 ctg7180000005370, whole genome shotgun sequence (5682 bp)
Overview 1 RT 1: 266-4795 bp Neighborhood of RT #1 [266, 4795] RVT-GII GIIM UvrD UvrD Feature: gene Location: 266-1612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 599-1259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 599-1 259 bp Feature: domain Description: GIIM Note: maturase Location: 1340-1532 bp Feature: domain Description: GIIM Note: maturase Location: 1 340-1 532 bp Feature: gene Location: 2022-4004 bp Feature: domain Description: UvrD Location: 2103-2328 bp Feature: domain Description: UvrD Location: 21 03-2328 bp Feature: domain Description: UvrD Location: 2640-3822 bp Feature: domain Description: UvrD Location: 2640-3822 bp Feature: gene Location: 4316-4795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrD (COG0210), RVT-GII, GIIM (pfam08388)

Seq: AHOK02000003.1 Leptospira santarosai str. HAI821 ctg7180000005354, whole genome shotgun sequence (59407 bp)
Overview 1 RT 1: 691-4062 bp Neighborhood of RT #1 [691, 4112] RVT-GII GIIM YfeH LPLAT_DUF374-like Feature: gene Location: 691-2037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1024-1684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 4-1684 bp Feature: domain Description: GIIM Note: maturase Location: 1765-1957 bp Feature: domain Description: GIIM Note: maturase Location: 1765-1957 bp Feature: gene Location: 2316-3176 bp Feature: domain Description: YfeH Location: 2337-3165 bp Feature: domain Description: YfeH Location: 2 337-3165 bp Feature: gene Location: 3408-4112 bp Feature: domain Description: LPLAT_DUF374-like Location: 3507-4062 bp Feature: domain Description: LPLAT_DUF374-like Location: 3507-4062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfeH (COG0385), LPLAT_DUF374-like (cd07983), RVT-GII, GIIM (pfam08388)

Seq: AHOK02000013.1 Leptospira santarosai str. HAI821 ctg7180000005360, whole genome shotgun sequence (256057 bp)
Overview 1 RT 1: 36482-42718 bp 2 RT 2: 252183-255962 bp Neighborhood of RT #1 [36482, 42720] Ank_2 Ank_2 catalase_clade_3 RVT-GII GIIM COG3488 Neighborhood of RT #2 [252183, 256057] ACAD S1-P1_nuclease RVT-GII GIIM Feature: gene Location: 36482-36979 bp Feature: domain Description: Ank_2 Location: 36536-36722 bp Feature: domain Description: Ank_2 Location: 3 653 6-3 6722 bp Feature: domain Description: Ank_2 Location: 36731-36890 bp Feature: domain Description: Ank_2 Location: 3 673 1-3 6890 bp Feature: gene Location: 36979-38436 bp Feature: domain Description: catalase_clade_3 Location: 37120-38398 bp Feature: domain Description: catalase_clade_3 Location: 3 7120-3 83 98 bp Feature: gene Location: 39039-40385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39372-40032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 93 72-4003 2 bp Feature: domain Description: GIIM Note: maturase Location: 40113-40305 bp Feature: domain Description: GIIM Note: maturase Location: 40113 -403 05 bp Feature: gene Location: 40893-41039 bp Feature: gene Location: 41308-42720 bp Feature: domain Description: COG3488 Location: 41404-42718 bp Feature: domain Description: COG3 488 Location: 41404-42718 bp Feature: gene Location: 252183-253247 bp Feature: domain Description: ACAD Location: 252477-252828 bp Feature: domain Description: ACAD Location: 252477-252828 bp Feature: gene Location: 254245-255123 bp Feature: domain Description: S1-P1_nuclease Location: 254323-255109 bp Feature: domain Description: S1-P1_nuclease Location: 2543 23 -255109 bp Feature: gene Location: 255377-256057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255380-255686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2553 80-255686 bp Feature: domain Description: GIIM Note: maturase Location: 255758-255962 bp Feature: domain Description: GIIM Note: maturase Location: 255758-255962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ank_2 (pfam12796), catalase_clade_3 (cd08156), RVT-GII, GIIM (pfam08388), COG3488 (Uncharacterized conserved protein with two CxxC motifs, DUF1111 family ), ACAD (cl09933), S1-P1_nuclease (pfam02265)

Seq: AHOK02000032.1 Leptospira santarosai str. HAI821 ctg7180000005339, whole genome shotgun sequence (291006 bp)
Overview 1 RT 1: 827-3810 bp 2 RT 2: 287769-291007 bp Neighborhood of RT #1 [827, 3854] RVT-GII His_Phos_1 cobD Neighborhood of RT #2 [287769, 291006] HK_WalK FecR RVT-GII Feature: gene Location: 827-1891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1136-1760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1136-1760 bp Feature: gene Location: 2248-2889 bp Feature: domain Description: His_Phos_1 Location: 2281-2773 bp Feature: domain Description: His_Phos_1 Location: 2281-2773 bp Feature: gene Location: 2886-3854 bp Feature: domain Description: cobD Location: 2895-3810 bp Feature: domain Description: cobD Location: 2895-3810 bp Feature: gene Location: 287769-288320 bp Feature: domain Description: HK_WalK Location: 288084-288297 bp Feature: domain Description: HK_WalK Location: 288084 -288297 bp Feature: gene Location: 288711-289415 bp Feature: domain Description: FecR Location: 288882-289197 bp Feature: domain Description: FecR Location: 288882-289197 bp Feature: gene Location: 290077-291006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 290386-291007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 290386-291007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT His_Phos_1 (pfam00300), cobD (TIGR00380), RVT-GII, HK_WalK (NF033092), FecR (pfam04773)