myRT

myRT report for GCA_000244775.3_gls454186v02

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Seq: AHOP02000009.1 Leptospira noguchii serovar Autumnalis str. ZUN142 ctg7180000008207, whole genome shotgun sequence (27676 bp)
Overview 1 RT 1: 474-4084 bp Neighborhood of RT #1 [474, 4084] RVT-GII KOG4768 HisKA_7TM Feature: gene Location: 474-1772 bp Ori: EMO42594.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 783-1407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 783-1 407 bp Feature: domain Description: KOG4768 Location: 1515-1647 bp Feature: domain Description: KOG4768 Location: 1 51 5-1 647 bp Feature: gene Location: 2549-3439 bp Ori: EMO42602.1 Feature: domain Description: HisKA_7TM Location: 2561-3197 bp Feature: domain Description: HisKA_7TM Location: 2561 -31 97 bp Feature: gene Location: 3473-4084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), HisKA_7TM (pfam16927)

Seq: AHOP02000053.1 Leptospira noguchii serovar Autumnalis str. ZUN142 ctg7180000008209, whole genome shotgun sequence (71955 bp)
Overview 1 RT 1: 50459-57753 bp Neighborhood of RT #1 [50459, 57753] CsgG CsgG RVT-UNC PRK09182 Feature: gene Location: 50459-51379 bp Ori: EMO39575.1 Feature: domain Description: CsgG Location: 50600-50876 bp Feature: domain Description: CsgG Location: 50600-50876 bp Feature: domain Description: CsgG Location: 50879-50954 bp Feature: domain Description: CsgG Location: 50879-50954 bp Feature: gene Location: 51718-52275 bp Feature: gene Location: 52551-56054 bp Ori: EMO39561.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 53124-53574 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 5312 4-53574 bp Feature: gene Location: 56066-56782 bp Ori: EMO39566.1 Feature: domain Description: PRK09182 Location: 56084-56735 bp Feature: domain Description: PRK09182 Location: 56084-56735 bp Feature: gene Location: 56854-57753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CsgG (pfam03783), RVT-UG5/RVT-DGRs/RVT-GII/RVT-UG1(RVT-UNC), PRK09182 (DNA polymerase III subunit epsilon; Validated)

Seq: AHOP02000048.1 Leptospira noguchii serovar Autumnalis str. ZUN142 ctg7180000008212, whole genome shotgun sequence (43263 bp)
Overview 1 RT 1: 30420-36280 bp Neighborhood of RT #1 [30420, 37344] RVT-UG28b AE_Prim_S_like Feature: gene Location: 30420-31469 bp Feature: gene Location: 32125-33192 bp Feature: gene Location: 33291-35051 bp Ori: EMO39809.1 Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 33729-34440 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 3 3 729-3 4440 bp Feature: gene Location: 35092-35217 bp Feature: gene Location: 35731-37344 bp Ori: EMO39838.1 Feature: domain Description: AE_Prim_S_like Location: 36061-36280 bp Feature: domain Description: AE_Prim_S_like Location: 3 6061-3 6280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28b, AE_Prim_S_like (cl01287)