myRT

myRT report for GCA_000244895.1_ASM24489v1

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Seq: CM001441.1 Desulfosporosinus youngiae DSM 17734 chromosome, whole genome shotgun sequence (5660978 bp)
Overview 1 RT 1: 1148910-1154384 bp 2 RT 2: 2119404-2126584 bp 3 RT 3: 4995114-5004126 bp Neighborhood of RT #1 [1148910, 1154419] PBP2_phosphate_like_1 RVT-GII GIIM PstC PstA Neighborhood of RT #2 [2119404, 2126584] COG5421 RVT_N RVT-GII GIIM HNHc Neighborhood of RT #3 [4995114, 5004164] ComEC_Rec2 ComEC_Rec2 ComEA RVT-GII GIIM YlaK CW_binding_2 CW_binding_2 CW_binding_2 Feature: gene Location: 1148910-1149371 bp Feature: gene Location: 1149664-1150578 bp Feature: domain Description: PBP2_phosphate_like_1 Location: 1149790-1150561 bp Feature: domain Description: PBP2_phosphate_like_1 Location: 1 1 49790-1 1 50561 bp Feature: gene Location: 1151034-1152443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1151388-1152006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 51 388-1 1 52006 bp Feature: domain Description: GIIM Note: maturase Location: 1152057-1152288 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 52057-1 1 52288 bp Feature: gene Location: 1152571-1153446 bp Feature: domain Description: PstC Location: 1152583-1153429 bp Feature: domain Description: PstC Location: 1 1 52583-1 1 53429 bp Feature: gene Location: 1153586-1154419 bp Feature: domain Description: PstA Location: 1153619-1154384 bp Feature: domain Description: PstA Location: 1 1 5361 9-1 1 54384 bp Feature: gene Location: 2119404-2121086 bp Feature: domain Description: COG5421 Location: 2119962-2120928 bp Feature: domain Description: COG5421 Location: 21 1 9962-21 20928 bp Feature: gene Location: 2121968-2122108 bp Feature: gene Location: 2122572-2124350 bp Feature: RT Description: RVT_N Location: 2122626-2122872 bp Feature: RT Description: RVT_N Location: 21 22626-21 22872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2122926-2123586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 22926-21 23586 bp Feature: domain Description: GIIM Note: maturase Location: 2123649-2123883 bp Feature: domain Description: GIIM Note: maturase Location: 21 23649-21 23883 bp Feature: domain Description: HNHc Note: nucleases Location: 2124087-2124243 bp Feature: domain Description: HNHc Note: nucleases Location: 21 24087-21 24243 bp Feature: gene Location: 2124733-2125707 bp Feature: gene Location: 2126417-2126584 bp Feature: gene Location: 4995114-4997573 bp Feature: domain Description: ComEC_Rec2 Location: 4995564-4996491 bp Feature: domain Description: ComEC_Rec2 Location: 4995564-4996491 bp Feature: domain Description: ComEC_Rec2 Location: 4996731-4997520 bp Feature: domain Description: ComEC_Rec2 Location: 4996731 -4997520 bp Feature: gene Location: 4997570-4998166 bp Feature: domain Description: ComEA Location: 4997687-4998158 bp Feature: domain Description: ComEA Location: 4997687-49981 58 bp Feature: gene Location: 4998399-4999808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4998753-4999371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4998753-4999371 bp Feature: domain Description: GIIM Note: maturase Location: 4999422-4999653 bp Feature: domain Description: GIIM Note: maturase Location: 4999422-4999653 bp Feature: gene Location: 5000311-5001636 bp Feature: domain Description: YlaK Location: 5000317-5001634 bp Feature: domain Description: YlaK Location: 500031 7-5001 634 bp Feature: gene Location: 5002026-5004164 bp Feature: domain Description: CW_binding_2 Location: 5003235-5003496 bp Feature: domain Description: CW_binding_2 Location: 5003235-5003496 bp Feature: domain Description: CW_binding_2 Location: 5003547-5003811 bp Feature: domain Description: CW_binding_2 Location: 5003547-500381 1 bp Feature: domain Description: CW_binding_2 Location: 5003853-5004126 bp Feature: domain Description: CW_binding_2 Location: 5003853-50041 26 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_phosphate_like_1 (cd13653), RVT-GII, GIIM (pfam08388), PstC (COG0573), PstA (COG0581), COG5421 (Transposase ), RVT_N (pfam13655), HNHc (smart00507), ComEC_Rec2 (TIGR00361), ComEA (COG1555)
YlaK (COG1875), CW_binding_2 (pfam04122)