myRT

myRT report for GCA_000245395.1_ASM24539v1

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Seq: AGNN01000015.1 Pseudomonas syringae pv. theae NCPPB 2598 scf_12387_27_contig_1, whole genome shotgun sequence (1837 bp)
Overview 1 RT 1: 381-1614 bp Neighborhood of RT #1 [381, 1748] RVT-GII GIIM Feature: gene Location: 381-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 714-1329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 4-1 329 bp Feature: domain Description: GIIM Note: maturase Location: 1386-1614 bp Feature: domain Description: GIIM Note: maturase Location: 1 386-1 61 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JH600502.1 Pseudomonas syringae pv. theae NCPPB 2598 genomic scaffold scf_12387_147, whole genome shotgun sequence (25282 bp)
Overview 1 RT 1: 21790-24663 bp Neighborhood of RT #1 [21790, 25196] nadE PRK13981 RVT-UG17 Feature: gene Location: 21790-22095 bp Feature: domain Description: nadE Location: 21793-22090 bp Feature: domain Description: nadE Location: 2 1793-2 2 090 bp Feature: gene Location: 22489-24141 bp Feature: domain Description: PRK13981 Location: 22504-24130 bp Feature: domain Description: PRK13981 Location: 2 2 504-2 4130 bp Feature: gene Location: 24312-25196 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 24336-24663 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 4336-2 4663 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nadE (TIGR00552), PRK13981 (NAD synthetase; Provisional), RVT-UG17

Seq: JH600542.1 Pseudomonas syringae pv. theae NCPPB 2598 genomic scaffold scf_12387_386, whole genome shotgun sequence (68895 bp)
Overview 1 RT 1: 103-2605 bp Neighborhood of RT #1 [103, 2605] RVT-GII GIIM TnpB_IS66 Feature: gene Location: 103-1371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307-964 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 07-964 bp Feature: domain Description: GIIM Note: maturase Location: 1042-1264 bp Feature: domain Description: GIIM Note: maturase Location: 1042-1264 bp Feature: gene Location: 1778-2086 bp Feature: domain Description: TnpB_IS66 Location: 1808-1961 bp Feature: domain Description: TnpB_IS66 Location: 1808-1961 bp Feature: gene Location: 2441-2605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TnpB_IS66 (pfam05717)