myRT

myRT report for GCA_000245455.1_ASM24545v1

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Seq: AGNQ01000010.1 Pseudomonas syringae pv. actinidiae PA459 scf_12386_12_contig_1, whole genome shotgun sequence (649 bp)
Overview 1 RT 1: 3-570 bp Neighborhood of RT #1 [3, 647] RVT-GII Feature: gene Location: 3-647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AGNQ01000042.1 Pseudomonas syringae pv. actinidiae PA459 scf_12386_43_contig_1, whole genome shotgun sequence (22150 bp)
Overview 1 RT 1: 15601-20451 bp Neighborhood of RT #1 [15601, 20451] SIRT5_Af1_CobB RVT-UG15 Feature: gene Location: 15601-16788 bp Feature: gene Location: 16871-17416 bp Feature: domain Description: SIRT5_Af1_CobB Location: 16919-17351 bp Feature: domain Description: SIRT5_Af1_CobB Location: 16919-17351 bp Feature: gene Location: 17703-19349 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 18150-18561 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 18150-18561 bp Feature: gene Location: 19642-19818 bp Feature: gene Location: 20179-20451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIRT5_Af1_CobB (cd01412), RVT-UG15

Seq: AGNQ01000097.1 Pseudomonas syringae pv. actinidiae PA459 scf_12386_95_contig_1, whole genome shotgun sequence (1436 bp)
Overview 1 RT 1: 88-1198 bp Neighborhood of RT #1 [88, 1371] RVT-GII GIIM Feature: gene Location: 88-1371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328-943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 28-943 bp Feature: domain Description: GIIM Note: maturase Location: 988-1198 bp Feature: domain Description: GIIM Note: maturase Location: 988-1198 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AGNQ01000222.1 Pseudomonas syringae pv. actinidiae PA459 scf_12386_217_contig_1, whole genome shotgun sequence (1566 bp)
Overview 1 RT 1: 258-1014 bp Neighborhood of RT #1 [258, 1565] RVT-Retrons Feature: gene Location: 258-1565 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 387-1014 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 387-1014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: AGNQ01000602.1 Pseudomonas syringae pv. actinidiae PA459 scf_12386_685_contig_1, whole genome shotgun sequence (246 bp)
Overview 1 RT 1: 3-189 bp Neighborhood of RT #1 [3, 245] RVT-UG3 Feature: gene Location: 3-245 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 63-189 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 63-189 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG3