myRT

myRT report for GCA_000245815.1_Dolo_pigr_ATCC_51524_V1

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Seq: JH601103.1 Dolosigranulum pigrum ATCC 51524 genomic scaffold supercont1.1, whole genome shotgun sequence (1523526 bp)
Overview 1 RT 1: 986101-992179 bp 2 RT 2: 1302129-1310143 bp Neighborhood of RT #1 [986101, 992223] KilA-N CadD RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 Neighborhood of RT #2 [1302129, 1310562] Ykof Ykof Ykof Ykof RVT-AbiP2 T5orf172 ResIII Eco57I N6_Mtase Feature: gene Location: 986101-986937 bp Ori: EHR32786.1 Feature: domain Description: KilA-N Location: 986170-986524 bp Feature: domain Description: KilA-N Location: 9861 70-986524 bp Feature: gene Location: 987561-988166 bp Ori: EHR32787.1 Feature: domain Description: CadD Location: 987567-988155 bp Feature: domain Description: CadD Location: 987567-9881 55 bp Feature: gene Location: 988725-990020 bp Ori: EHR32788.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 988950-989565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 988950-989565 bp Feature: domain Description: GIIM Note: maturase Location: 989625-989856 bp Feature: domain Description: GIIM Note: maturase Location: 989625-989856 bp Feature: gene Location: 990248-991813 bp Ori: EHR32789.1 Feature: domain Description: DDE_Tnp_IS66 Location: 990797-991622 bp Feature: domain Description: DDE_Tnp_IS66 Location: 990797-991 622 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 991646-991766 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 991 646-991 766 bp Feature: gene Location: 991873-992223 bp Ori: EHR32790.1 Feature: domain Description: TnpB_IS66 Location: 991903-992179 bp Feature: domain Description: TnpB_IS66 Location: 991 903-9921 79 bp Feature: gene Location: 1302129-1302302 bp Feature: gene Location: 1302439-1303614 bp Ori: EHR33079.1 Feature: domain Description: Ykof Location: 1302502-1302673 bp Feature: domain Description: Ykof Location: 1 302502-1 302673 bp Feature: domain Description: Ykof Location: 1302778-1303000 bp Feature: domain Description: Ykof Location: 1 302778-1 303000 bp Feature: domain Description: Ykof Location: 1303054-1303264 bp Feature: domain Description: Ykof Location: 1 303054-1 303264 bp Feature: domain Description: Ykof Location: 1303351-1303549 bp Feature: domain Description: Ykof Location: 1 303351 -1 303549 bp Feature: gene Location: 1303896-1305431 bp Ori: EHR33080.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1304364-1304814 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 304364-1 30481 4 bp Feature: gene Location: 1305453-1309823 bp Ori: EHR33081.1 Feature: domain Description: T5orf172 Location: 1305534-1305753 bp Feature: domain Description: T5orf1 72 Location: 1 305534-1 305753 bp Feature: domain Description: ResIII Location: 1305855-1306389 bp Feature: domain Description: ResIII Location: 1 305855-1 306389 bp Feature: domain Description: Eco57I Location: 1308801-1309086 bp Feature: domain Description: Eco57I Location: 1 308801 -1 309086 bp Feature: gene Location: 1309813-1310562 bp Ori: EHR33082.1 Feature: domain Description: N6_Mtase Location: 1309852-1310143 bp Feature: domain Description: N6_Mtase Location: 1 309852-1 31 01 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KilA-N (pfam04383), CadD (COG4300), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717), Ykof (pfam07615), RVT-AbiP2, T5orf172 (smart00974)
ResIII (pfam04851), Eco57I (pfam07669), N6_Mtase (pfam02384)