myRT

myRT report for GCA_000246595.2_CLC_glsol169

Download annotations/find similar RTs

Seq: AHQV01000347.1 Leptospira interrogans serovar Bataviae str. UT234 contig_347, whole genome shotgun sequence (3512 bp)
Overview 1 RT 1: 100-3185 bp Neighborhood of RT #1 [100, 3301] rve RVT-GII GIIM RVT-GII rve_3 Feature: gene Location: 100-237 bp Feature: gene Location: 495-1166 bp Feature: domain Description: rve Location: 894-1149 bp Feature: domain Description: rve Location: 894-1 1 49 bp Feature: gene Location: 1239-1850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1248-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 248-1 464 bp Feature: domain Description: GIIM Note: maturase Location: 1548-1776 bp Feature: domain Description: GIIM Note: maturase Location: 1 548-1 776 bp Feature: gene Location: 1858-2496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2071-2473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2071 -2473 bp Feature: gene Location: 3026-3301 bp Feature: domain Description: rve_3 Location: 3035-3185 bp Feature: domain Description: rve_3 Location: 3035-31 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), rve_3 (pfam13683), rve (pfam00665)

Seq: AHQV01000115.1 Leptospira interrogans serovar Bataviae str. UT234 contig_115, whole genome shotgun sequence (18766 bp)
Overview 1 RT 1: 1-3012 bp Neighborhood of RT #1 [1, 3386] RVT-GII KOG4768 RpoE FecR Feature: gene Location: 1-1017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28-652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8-652 bp Feature: domain Description: KOG4768 Location: 757-892 bp Feature: domain Description: KOG4768 Location: 757-892 bp Feature: gene Location: 1774-2274 bp Feature: domain Description: RpoE Location: 1780-2260 bp Feature: domain Description: RpoE Location: 1780-2 2 60 bp Feature: gene Location: 2295-3386 bp Feature: domain Description: FecR Location: 2721-3012 bp Feature: domain Description: FecR Location: 2 72 1-3012 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RpoE (COG3343), FecR (pfam04773)