myRT

myRT report for GCA_000246895.2_ASM24689v2

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Seq: BAEV01000142.1 Clostridium arbusti SL206 DNA, contig: contig00142, whole genome shotgun sequence (7459 bp)
Overview 1 RT 1: 1775-6607 bp Neighborhood of RT #1 [1775, 6636] DUR1B SASP RVT-GII GIIM YmaF YcjR Feature: gene Location: 1775-2767 bp Feature: domain Description: DUR1B Location: 1784-2759 bp Feature: domain Description: DUR1 B Location: 1 784-2759 bp Feature: gene Location: 2886-3110 bp Feature: domain Description: SASP Location: 2949-3066 bp Feature: domain Description: SASP Location: 2949-3066 bp Feature: gene Location: 3611-5011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3962-4580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3962-4580 bp Feature: domain Description: GIIM Note: maturase Location: 4631-4865 bp Feature: domain Description: GIIM Note: maturase Location: 4631 -4865 bp Feature: gene Location: 5349-5630 bp Feature: domain Description: YmaF Location: 5355-5607 bp Feature: domain Description: YmaF Location: 5355-5607 bp Feature: gene Location: 5866-6636 bp Feature: domain Description: YcjR Location: 5884-6607 bp Feature: domain Description: YcjR Location: 5884-6607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUR1B (COG1984), SASP (pfam00269), RVT-GII, GIIM (pfam08388), YmaF (pfam12788), YcjR (COG1082)

Seq: BAEV01000101.1 Clostridium arbusti SL206 DNA, contig: contig00101, whole genome shotgun sequence (14073 bp)
Overview 1 RT 1: 3089-10125 bp Neighborhood of RT #1 [3089, 10292] xerC DUF2971 RVT-UG14 PLDc_N_DEXD_b3 SSL2 UvrD_C UvrD_C Feature: gene Location: 3089-3238 bp Feature: domain Description: xerC Location: 3092-3221 bp Feature: domain Description: xerC Location: 3092 -32 2 1 bp Feature: gene Location: 3420-4148 bp Feature: domain Description: DUF2971 Location: 3756-3969 bp Feature: domain Description: DUF2 971 Location: 3756-3969 bp Feature: gene Location: 4569-6131 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 4914-5277 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 4914-52 77 bp Feature: gene Location: 6668-9169 bp Feature: domain Description: PLDc_N_DEXD_b3 Location: 6773-7193 bp Feature: domain Description: PLDc_N_DEXD_b3 Location: 6773-7193 bp Feature: domain Description: SSL2 Location: 7307-8576 bp Feature: domain Description: SSL2 Location: 7307-8576 bp Feature: gene Location: 9336-10292 bp Feature: domain Description: UvrD_C Location: 9576-9921 bp Feature: domain Description: UvrD_C Location: 9576-992 1 bp Feature: domain Description: UvrD_C Location: 9936-10125 bp Feature: domain Description: UvrD_C Location: 9936-1012 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT xerC (PRK01287), DUF2971 (pfam11185), RVT-UG14, PLDc_N_DEXD_b3 (cd09205), SSL2 (COG1061), UvrD_C (pfam13361)

Seq: BAEV01000002.1 Clostridium arbusti SL206 DNA, contig: contig00002, whole genome shotgun sequence (104647 bp)
Overview 1 RT 1: 98838-104539 bp Neighborhood of RT #1 [98838, 104539] SatD GatB RVT-UG19 Feature: gene Location: 98838-99512 bp Feature: domain Description: SatD Location: 98877-99411 bp Feature: domain Description: SatD Location: 98877-99411 bp Feature: gene Location: 99788-100576 bp Feature: domain Description: GatB Location: 99791-100571 bp Feature: domain Description: GatB Location: 99791-100571 bp Feature: gene Location: 101418-103499 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 101784-102270 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 101784-102270 bp Feature: gene Location: 103700-104539 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SatD (pfam16264), GatB (COG0064), RVT-UG19