myRT

myRT report for GCA_000247275.2_ASM24727v2

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Seq: AHLL01000022.1 Staphylococcus aureus subsp. aureus IS-3 contig00012, whole genome shotgun sequence (27684 bp)
Overview 1 RT 1: 9590-16137 bp Neighborhood of RT #1 [9590, 16137] MecR1 Transpeptidase PenP RVT-AbiK RVT-AbiK Feature: gene Location: 9590-11347 bp Ori: EHS15610.1 Gene: blaR Feature: domain Description: MecR1 Location: 9593-10622 bp Feature: domain Description: MecR1 Location: 9593-1 0622 bp Feature: domain Description: Transpeptidase Location: 10676-11321 bp Feature: domain Description: Transpeptidase Location: 1 0676-1 1 321 bp Feature: gene Location: 11454-12299 bp Ori: EHS15602.1 Feature: domain Description: PenP Location: 11466-12291 bp Feature: domain Description: PenP Location: 1 1 466-1 2291 bp Feature: gene Location: 12653-13744 bp Ori: EHS15616.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 12656-12836 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1 2656-1 2836 bp Feature: gene Location: 13831-14421 bp Ori: EHS15597.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 14305-14404 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 1 4305-1 4404 bp Feature: gene Location: 14961-15569 bp Feature: gene Location: 15649-16137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MecR1 (COG4219), Transpeptidase (pfam00905), PenP (COG2367), RVT-AbiK

Seq: AHLL01000073.1 Staphylococcus aureus subsp. aureus IS-3 contig00029, whole genome shotgun sequence (28486 bp)
Overview 1 RT 1: 23499-28445 bp Neighborhood of RT #1 [23499, 28445] AlsD PRK08617 RVT-Retrons Feature: gene Location: 23499-24203 bp Ori: EHS10619.1 Gene: budA_2 Feature: domain Description: AlsD Location: 23502-24201 bp Feature: domain Description: AlsD Location: 2 3502 -2 42 01 bp Feature: gene Location: 24240-25904 bp Ori: EHS10627.1 Gene: alsS Feature: domain Description: PRK08617 Location: 24249-25896 bp Feature: domain Description: PRK08617 Location: 2 42 49-2 5896 bp Feature: gene Location: 27154-27945 bp Ori: EHS10640.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27190-27616 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 7190-2 7616 bp Feature: gene Location: 28260-28445 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlsD (COG3527), PRK08617 (acetolactate synthase AlsS), RVT-Retrons