myRT

myRT report for GCA_000247525.2_ASM24752v2

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Seq: AFNE01000406.1 Ruminococcus flavefaciens 17 contig00375, whole genome shotgun sequence (7053 bp)
Overview 1 RT 1: 2857-7040 bp Neighborhood of RT #1 [2857, 7040] Hydrolase_4 Hydrolase_4 RVT-Retrons RpoE Feature: gene Location: 2857-3174 bp Feature: gene Location: 3317-4372 bp Feature: domain Description: Hydrolase_4 Location: 3560-3875 bp Feature: domain Description: Hydrolase_4 Location: 3560-3875 bp Feature: domain Description: Hydrolase_4 Location: 4013-4088 bp Feature: domain Description: Hydrolase_4 Location: 401 3-4088 bp Feature: gene Location: 4384-5337 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4531-5083 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4531 -5083 bp Feature: gene Location: 5670-6575 bp Feature: domain Description: RpoE Location: 5712-6129 bp Feature: domain Description: RpoE Location: 571 2-61 29 bp Feature: gene Location: 6837-7040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Hydrolase_4 (pfam12146), RVT-Retrons, RpoE (COG3343)

Seq: AFNE01000030.1 Ruminococcus flavefaciens 17 contig00030, whole genome shotgun sequence (8928 bp)
Overview 1 RT 1: 1-2039 bp Neighborhood of RT #1 [1, 2071] CotJC RVT-DGRs Avd_like Feature: gene Location: 1-255 bp Feature: domain Description: CotJC Location: 4-256 bp Feature: domain Description: CotJC Location: 4-2 56 bp Feature: gene Location: 334-1341 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 529-1135 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 52 9-1135 bp Feature: gene Location: 1407-1610 bp Feature: gene Location: 1655-2071 bp Feature: domain Description: Avd_like Location: 1706-2039 bp Feature: domain Description: Avd_like Location: 1706-2 039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CotJC (COG3546), RVT-DGRs, Avd_like (cd16376)