myRT

myRT report for GCA_000247835.1_Kleb_oxyt_10-5242_V1

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Seq: JH603153.1 Klebsiella michiganensis strain 10-5242 supercont1.1, whole genome shotgun sequence (4720244 bp)
Overview 1 RT 1: 4514637-4521358 bp Neighborhood of RT #1 [4514637, 4521483] trmE PRK09692 RVT-Retrons Phage_int_SAM_2 Integrase_1 Feature: gene Location: 4514637-4516001 bp Feature: domain Description: trmE Location: 4514640-4515999 bp Feature: domain Description: trmE Location: 451 4640-451 5999 bp Feature: gene Location: 4516517-4517539 bp Feature: domain Description: PRK09692 Location: 4516532-4517480 bp Feature: domain Description: PRK09692 Location: 451 6532-451 7480 bp Feature: gene Location: 4517621-4518553 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4517777-4518320 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 451 7777-451 8320 bp Feature: gene Location: 4518879-4519748 bp Feature: gene Location: 4520605-4521483 bp Feature: domain Description: Phage_int_SAM_2 Location: 4520608-4520878 bp Feature: domain Description: Phage_int_SAM_2 Location: 4520608-4520878 bp Feature: domain Description: Integrase_1 Location: 4520917-4521358 bp Feature: domain Description: Integrase_1 Location: 452091 7-4521 358 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT trmE (PRK05291), PRK09692 (Integrase; provisional), RVT-Retrons, Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835)

Seq: JH603156.1 Klebsiella michiganensis strain 10-5242 supercont1.4, whole genome shotgun sequence (81363 bp)
Overview 1 RT 1: 68158-72594 bp Neighborhood of RT #1 [68158, 72602] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 68158-68535 bp Feature: domain Description: DDE_Tnp_IS1 Location: 68161-68533 bp Feature: domain Description: DDE_Tnp_IS1 Location: 68161-68533 bp Feature: gene Location: 68580-68855 bp Feature: domain Description: InsA Location: 68586-68850 bp Feature: domain Description: InsA Location: 68586-68850 bp Feature: gene Location: 69007-70491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69409-70099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69409-70099 bp Feature: gene Location: 70900-71331 bp Feature: domain Description: PRK10276 Location: 70951-71314 bp Feature: domain Description: PRK102 76 Location: 70951-71314 bp Feature: gene Location: 71331-72602 bp Feature: domain Description: umuC Location: 71334-72594 bp Feature: domain Description: umuC Location: 71334-72 594 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)