myRT

myRT report for GCA_000247875.1_Kleb_oxyt_10-5245_V1

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Seq: JH603138.1 Klebsiella oxytoca 10-5245 genomic scaffold supercont1.2, whole genome shotgun sequence (98108 bp)
Overview 1 RT 1: 32443-36479 bp Neighborhood of RT #1 [32443, 36484] HTH_Tnp_1 PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 32443-32727 bp Feature: domain Description: HTH_Tnp_1 Location: 32449-32656 bp Feature: domain Description: HTH_Tnp_1 Location: 32449-32656 bp Feature: gene Location: 33046-33462 bp Feature: domain Description: PHA02517 Location: 33049-33442 bp Feature: domain Description: PHA0251 7 Location: 33049-33442 bp Feature: gene Location: 33615-35138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33888-34620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33888-34620 bp Feature: domain Description: GIIM Note: maturase Location: 34695-34893 bp Feature: domain Description: GIIM Note: maturase Location: 34695-34893 bp Feature: gene Location: 35730-35969 bp Feature: domain Description: PHA02517 Location: 35733-35904 bp Feature: domain Description: PHA0251 7 Location: 35733-35904 bp Feature: gene Location: 36293-36484 bp Feature: domain Description: InsE Location: 36302-36479 bp Feature: domain Description: InsE Location: 36302-36479 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: JH603140.1 Klebsiella oxytoca 10-5245 genomic scaffold supercont1.4, whole genome shotgun sequence (50796 bp)
Overview 1 RT 1: 9580-14022 bp 2 RT 2: 45871-50268 bp Neighborhood of RT #1 [9580, 14024] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Neighborhood of RT #2 [45871, 50276] PRK13752 PHA02517 RVT-GII GIIM InsE PIN_VapC4-5_FitB-like Feature: gene Location: 9580-10851 bp Feature: domain Description: umuC Location: 9583-10843 bp Feature: domain Description: umuC Location: 9583-10843 bp Feature: gene Location: 10851-11282 bp Feature: domain Description: PRK10276 Location: 10902-11265 bp Feature: domain Description: PRK102 76 Location: 10902 -112 65 bp Feature: gene Location: 11691-13175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12093-12783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 093-12 783 bp Feature: gene Location: 13327-13602 bp Feature: domain Description: InsA Location: 13333-13597 bp Feature: domain Description: InsA Location: 13333-13597 bp Feature: gene Location: 13731-14024 bp Feature: domain Description: DDE_Tnp_IS1 Location: 13734-14022 bp Feature: domain Description: DDE_Tnp_IS1 Location: 13734-1402 2 bp Feature: gene Location: 45871-46326 bp Feature: domain Description: PRK13752 Location: 45874-46297 bp Feature: domain Description: PRK13752 Location: 45874-462 97 bp Feature: gene Location: 46323-46667 bp Feature: domain Description: PHA02517 Location: 46326-46629 bp Feature: domain Description: PHA02 517 Location: 4632 6-4662 9 bp Feature: gene Location: 46790-48313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47063-47795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47063-47795 bp Feature: domain Description: GIIM Note: maturase Location: 47870-48068 bp Feature: domain Description: GIIM Note: maturase Location: 47870-48068 bp Feature: gene Location: 49372-49656 bp Feature: domain Description: InsE Location: 49384-49645 bp Feature: domain Description: InsE Location: 49384-49645 bp Feature: gene Location: 49860-50276 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 49878-50268 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 49878-502 68 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400), umuC (PRK03609), PRK13752 (mercuric resistance operon transcriptional regulator MerR), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), InsE (COG2963), PIN_VapC4-5_FitB-like (cd18754)

Seq: JH603137.1 Klebsiella oxytoca 10-5245 genomic scaffold supercont1.1, whole genome shotgun sequence (5916283 bp)
Overview 1 RT 1: 4359160-4366902 bp Neighborhood of RT #1 [4359160, 4366916] ICE_TraI_Pfluor TraI_2_C KOG2108 KOG2108 KOG2108 RVT-GII GIIM PRK10458 IS5 Feature: gene Location: 4359160-4360779 bp Feature: domain Description: ICE_TraI_Pfluor Location: 4359250-4359877 bp Feature: domain Description: ICE_TraI_Pfluor Location: 43 59250-43 59877 bp Feature: domain Description: TraI_2_C Location: 4360420-4360768 bp Feature: domain Description: TraI_2_C Location: 43 60420-43 60768 bp Feature: gene Location: 4360846-4362321 bp Feature: domain Description: KOG2108 Location: 4360903-4361074 bp Feature: domain Description: KOG2108 Location: 43 60903 -43 61074 bp Feature: domain Description: KOG2108 Location: 4361335-4361647 bp Feature: domain Description: KOG2108 Location: 43 613 3 5-43 61647 bp Feature: domain Description: KOG2108 Location: 4361944-4362217 bp Feature: domain Description: KOG2108 Location: 43 61944-43 62217 bp Feature: gene Location: 4362482-4363867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4362809-4363427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 62809-43 63 427 bp Feature: domain Description: GIIM Note: maturase Location: 4363481-4363706 bp Feature: domain Description: GIIM Note: maturase Location: 43 63 481-43 63 706 bp Feature: gene Location: 4365050-4365895 bp Feature: domain Description: PRK10458 Location: 4365077-4365869 bp Feature: domain Description: PRK10458 Location: 43 65077-43 65869 bp Feature: gene Location: 4365936-4366916 bp Feature: domain Description: IS5 Location: 4366125-4366902 bp Feature: domain Description: IS5 Location: 43 66125-43 66902 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ICE_TraI_Pfluor (TIGR03760), TraI_2_C (pfam07515), KOG2108 (KOG2108, 3'-5' DNA helicase ), RVT-GII, GIIM (pfam08388), PRK10458 (DNA cytosine methylase; Provisional), IS5 (COG3039)

Seq: JH603141.1 Klebsiella oxytoca 10-5245 genomic scaffold supercont1.5, whole genome shotgun sequence (20495 bp)
Overview 1 RT 1: 10870-15246 bp Neighborhood of RT #1 [10870, 15275] PIN_VapC4-5_FitB-like InsE RVT-GII GIIM PHA02517 PRK13752 Feature: gene Location: 10870-11286 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 10888-11278 bp Feature: domain Description: PIN_VapC4 -5_FitB-like Location: 10888-11278 bp Feature: gene Location: 11490-11774 bp Feature: domain Description: InsE Location: 11502-11763 bp Feature: domain Description: InsE Location: 11502-11763 bp Feature: gene Location: 12833-14356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13106-13838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13106-13838 bp Feature: domain Description: GIIM Note: maturase Location: 13913-14111 bp Feature: domain Description: GIIM Note: maturase Location: 13913-14 111 bp Feature: gene Location: 14479-14823 bp Feature: domain Description: PHA02517 Location: 14482-14785 bp Feature: domain Description: PHA02517 Location: 14 4 82-14 785 bp Feature: gene Location: 14820-15275 bp Feature: domain Description: PRK13752 Location: 14823-15246 bp Feature: domain Description: PRK13752 Location: 14 823-1524 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_VapC4-5_FitB-like (cd18754), InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), PRK13752 (mercuric resistance operon transcriptional regulator MerR)